Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01575 ATGGCATCGAATAAATGGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCATGGAAAAAAGGTGGGGCATCAGAGAAAGACATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGAGGCTTTTAAAAGAAGAACCTAAATGGATGGGAGCATGCACCGAAATTTTTTCAAAGAGAACAAAGAATTCTAGTGGTGCATACACGGCATCACCAAAATCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATAGAGCGTCCAATGGGACAAAAGGCGGAAAAACGAAAAGGTAAGGCAAAGGAAAATACAAATGCAATTGAACCTCCTTCTAGTGTTATTTCTGATACAATGAATAAAAGAATGGATTTAATGGAAAATCTAGCACGGCTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTCTGAAGCACGACTTAAGGAGGAAGAAAACAAATTAATCAAGGAAAAGATGGAGTTTGAAGCAATGCAGTTCATAATGTCAGACACTTCTAAGATGAATGATACTCAGCGTGAATTTTATGAAAACATTGTAATAACCTAA 621 0.3671 MASNKWPCSKICWVLQTSCSWKKGGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKEEPKWMGACTEIFSKRTKNSSGAYTASPKSETPSSYEFNSSSPIERPMGQKAEKRKGKAKENTNAIEPPSSVISDTMNKRMDLMENLARLKEEENKLVKEKMESEARLKEEENKLIKEKMEFEAMQFIMSDTSKMNDTQREFYENIVIT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01575 206 MobiDBLite consensus disorder prediction 77 130 - -
Vivi4g01575 206 PANTHER - 20 198 - -
Vivi4g01575 206 Pfam No apical meristem-associated C-terminal domain 46 201 IPR029466 -
Vivi4g01575 206 MobiDBLite consensus disorder prediction 77 103 - -
Vivi4g01575 206 Coils Coil 130 178 - -
Vivi4g01575 206 MobiDBLite consensus disorder prediction 105 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01575 Vivi-Chr4 62483620 62484240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01575 4 151 Glutathione S-transferase Gene Family AT5G41240 28.387 3.40e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01575 - - vvo:131630746 320.857