Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01536 ATGGAGATAGATTTAGTTTCTTCCCCCTCCAAGACAAAAGACATCGACGGCCTCCTCGCCGATGTCGGATACAAAGTCCGGTCTTCTGAGCTACATCAAGTAGCTCATAATATCGAACGGTTGGAGAACGCAATCGTGAATTCATCCAGCGACATTTCTCAATTCGCTTCTGATACTGTCCACTATGATCCTTCCGACATTGGCAATTGGGTGGACAATCTCCTCTCCGAATTCGACCACACAGCCTCTTTACCCTACGATTTTTCTGAACTTCCAGATCTCACAGCGCCGCTGCCGCTGCCACCGCCACAAGATCAACACTACCACCATCAATTAAAGGTGGTAACCACCGTTGAAGAAGACTCGGCGATAAAGCTGGTCCAGATGCTGATGACGTGTGCGGATTCCTTGCAACGTGGCAACTTACCATTGGCTGGCTCGTTAATTGAAGGCATGCAAGGGTTGTTAGCTGACATGAACACCAGCTGCGGCATTGGAAAAGTCGCCGGGTACTTCATTGATGCTTTGAACCGCCGTATATTCGGTATAAACAATGTTATCCATGTTTCTCCTCACGAGAACGATATCCTTTACCATCACTACTACGAAGCTTGTCCTTATCTCAAATTCGCTCACTTCACAGCGAATCAAGCTATACTGGAAGCTTTCAACGGCCACGATTGTGTTCATGTTATCGATTTCAACCTCATGCAAGGTCTTCAATGGCCGGCGCTGATTCAAGCTCTCGCTCTTCGTCCTGGTGGACCTCCATTTCTGCGGCTAACCGGCATTGGTCCGCCGTCGCCGGATGAGCGAGACAACCTCCGCGAAATCGGGCTGCGTCTCGCTGAGCTGGCTAGATCGGTAAACGTTAGATTCGCGTTTCGTGGAGTAGCGGCTTGGCGGCTTGAGGATGTGAAGCCGTGGATGCTTCAGGTTAGTTCTAAGGAAGTTGTTGCGGTTAACTCTATCATGCAACTTCATCGTCTTCTCGGATCTGGATCTGGATCTGAATCTGAATCTGATCCGATTTCTTCTGGTATTGAAATGGTTTTGGGTTGGATCCGAAGTTTGAACCCGAAAATCATGACGGTTGTGGAGCAGGAAGCGAACCATAACAAGGATGGGTTTATGGAGCGGTTCACGGAGGCACTGCATTATTACTCGACCGTTTTCGATTCCCTTGAAGCGTGTTCTGTTGAACCGGACAAGGCTATGGCTGAGATGTTTCTGCAAAGGGAGATATGCAATGTGGTGTGCTGCGAGGGATCGGCTCGGGTTGAGAGACATGAACCGCTAGTTAAGTGGAGGGAGCGGCTTGGTAAAGCCGGGTTCAGACCGTTACATTTGGGTTCTAACGCGTTTAAGCAAGCGAGTATGCTGTTGACTCTGTTTTCTGCGGAGGGTTATTGTGTGGAAGAGAACCAAGGGAGCTTGACTTTGGGTTGGCATAGCCGCCCTCTCATTGCGGCTTCGGCTTGGCAAGCAGTGCCTTTGCCACACGCTGAAACACTGCGTTTCGATCATTGA 1530 0.4961 MEIDLVSSPSKTKDIDGLLADVGYKVRSSELHQVAHNIERLENAIVNSSSDISQFASDTVHYDPSDIGNWVDNLLSEFDHTASLPYDFSELPDLTAPLPLPPPQDQHYHHQLKVVTTVEEDSAIKLVQMLMTCADSLQRGNLPLAGSLIEGMQGLLADMNTSCGIGKVAGYFIDALNRRIFGINNVIHVSPHENDILYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPFLRLTGIGPPSPDERDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKEVVAVNSIMQLHRLLGSGSGSESESDPISSGIEMVLGWIRSLNPKIMTVVEQEANHNKDGFMERFTEALHYYSTVFDSLEACSVEPDKAMAEMFLQREICNVVCCEGSARVERHEPLVKWRERLGKAGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGSLTLGWHSRPLIAASAWQAVPLPHAETLRFDH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01536 509 ProSiteProfiles GRAS family profile. 117 495 IPR005202 -
Vivi4g01536 509 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 108 491 IPR005202 -
Vivi4g01536 509 SMART DELLA_2 16 88 - -
Vivi4g01536 509 Pfam Transcriptional regulator DELLA protein N terminal 16 82 IPR021914 -
Vivi4g01536 509 Gene3D - 14 78 IPR038088 -
Vivi4g01536 509 Pfam GRAS domain family 126 495 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01536 Vivi-Chr4 60318591 60321237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01536 15 495 GRAS Transcription Factor Family AT1G14920 47.287 5.01e-154 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi4g01536 GRAS 8.1e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01536 K14494 - gmx:100805968 756.133