Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01524 ATGGCTCCTCCATGGATTCAAGAACTCCATCTCAATTCCTTGACTATACCTATCACAATCATCAACAAATTCCCCGTTACTCCCTCCAAGCCTATTCCTGTTAAACCAGGTGATACTTTATACCTTTCAAACCTCGATGACATGATCGGGGCGCGCGTCTTCACACCAACCGTATATTTTTATCAATCCGACAGCTCGGGCGGGACTTTCCATAAACCTGTCACAGAAATACTTCGACGTTCGCTAGCCGATGTTTTGGTTCCTTACTACCCTCTCTCAGGAAGGTTAAGAGAAACAAAAAATGGTAAACTGGAAGTATTTTTCGGACAAGAACTAGAAGGAGCATTAATGGTTGAAGCAAGAACTAACATAGCTTTATCTGAACTAGGTGATTTTGCAGCACCAAACCCTTGTTGGGAACCATTGATCTTCAAGTTTCCCAATGAAGAACAATACAAAGTGTTGGAAATGCCACTTGTTATAGCCCAGGTAACACTCTTCACATGTGGTGGATTTAGCATCGGTTTACGCCTTTGTCATTGTATCTGTGATGGAATGGGAGCCATGCAATTTCTAGGAGCATGGGCTGCAACAGCTAAAACCGGAACATTGGTGACAGAACCTGAACCATGTTGGAATAGAGAAGTTTTCAAGCCACGAGATCCACCAGAAGTGAAGTTTCCACATATGGAGTTCATGAGAATTGATGAAAGATCAAATTTAACAATGAAACTATGGAAAACAAAGCCGGTTCAAAAATGTTGCACTACATTTGATGCAATGGCCGCACATATTTGGAGATCATGGGTTAAAGCTCTTGATGTGAAGCCTTTAGATTACCAATTAAGGTTAACATTTTCTGTCAATGCTAGACAGAAGCTTAAGAATCCACCATTGAAGGAAGGTTTTTATGGTAACGTGGTTTGTATTGCTTGCACAACAAGTAATGTTTCTGAGCTTGTGAATGGGAAATTACCAGAGACAACCCTTTGGGTTCGCGAAGCTAGACAGAATGTAACAGAAGAATATTTGAGATCAACAGTTGATTATGTTGAAGTTGATAGGCCAAAGCAGCTTGAGTTTGGTGGTAAGCTTACAATAACTCAATGGACAAGATTTTCAATATATAAATGTGCTGATTTTGGATGGGGTCAGCCAATTTATGCTGGTCCTATAGATTTAACACCTACACCTCAAGTTTGTGTGTTTTTACCTGAAGGGGAAGGTGACTGTAGTAATGGTTCTATGATTGTTTGCATTTGCTTGCCTGAATCTGCTGCTAACAAGTTTACACAAGCCTTGTTGATCGATTCTCTTTCGACATAG 1326 0.405 MAPPWIQELHLNSLTIPITIINKFPVTPSKPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQSDSSGGTFHKPVTEILRRSLADVLVPYYPLSGRLRETKNGKLEVFFGQELEGALMVEARTNIALSELGDFAAPNPCWEPLIFKFPNEEQYKVLEMPLVIAQVTLFTCGGFSIGLRLCHCICDGMGAMQFLGAWAATAKTGTLVTEPEPCWNREVFKPRDPPEVKFPHMEFMRIDERSNLTMKLWKTKPVQKCCTTFDAMAAHIWRSWVKALDVKPLDYQLRLTFSVNARQKLKNPPLKEGFYGNVVCIACTTSNVSELVNGKLPETTLWVREARQNVTEEYLRSTVDYVEVDRPKQLEFGGKLTITQWTRFSIYKCADFGWGQPIYAGPIDLTPTPQVCVFLPEGEGDCSNGSMIVCICLPESAANKFTQALLIDSLST 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01524 441 Gene3D - 15 233 IPR023213 -
Vivi4g01524 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 32 430 - -
Vivi4g01524 441 Gene3D - 234 434 IPR023213 -
Vivi4g01524 441 Pfam Transferase family 251 432 - -
Vivi4g01524 441 Pfam Transferase family 17 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01524 Vivi-Chr4 58992504 58994011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01524 21 435 Monolignol Biosynthesis Gene Families AT5G48930 29.754 1.09e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01524 K15400 - gmx:100802814 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01524 4 58992504 58994011 Vivi4g01524 4 58992504 58994011 ECH