Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01365 ATGGCGTTTGATCAAAACTCAAGTCCCGGAGATATGCGGCCACCACCACCGCCGAATGTAGTTCGATCGGAGGAGCCGCCACTTGTATTGCCAGTTACTACGGCGGCTGTTAGGGACAATGGAGCCTCCGGTGGGGTTCCTGTTTATTATCCTGATGGTGGATTGGCTGGAGTGGGATATGGAAATGTGGCTTCTGGCGGTGGTGGTGGTGCTGCTTCTACCACCTGGTGCATTCGCCCTGGGGTTCCCCATCCCCTTCCTCATCCTGCTTTGAACCCTACTGTTGGGTTTAGTTTTCCCAGTCGTGTTGCTGGTGGCAATGCTGGTGATATTTCGGGTAGTTTTGTTGCAACTGCGAATGGATATCCTTTGAATTCGGGTAATTGGGTTACTGGTAATGGTTTGGATAATAATAATCTTCAGAGTGGCAGAGTAATTGCCAATGGTGATGATCGTGCTGGTGGTGCTGGGTTGATTGGGTCTCGTTCTAGCCCCCCTGCTAGCCAGCGGGTTGATGAAAACGGCAGGGATGATTCGGTTTCGGGGCGGAAAATGAAATTTATGTGCAGTTATGGTGGGAAGATTTTGCCTAGACCTAGTGATGGAATGTTGAGGTATGTTGGTGGGCAGACTAGGATAATAAGTGTTAAGAGAGATGTGAGTTTTAATGATTTGGCACAAAAGATGGTTAATACTTTTGGGCAACCTGTGGTTATCAAATATCAGCTTCCTGGTGAGGATCTTGATGCATTGGTCTCGGTTTCCTGTGCCGATGATCTGGATAATATGATGGAAGAATATGAAAGGTTGATTGAGAGGTCTTCAGATGGTTCTCCAAAGTTAAGGGTCTTTCTGTTTTCTGCTTTGGAATTTGATCCTTCTGGTGTGTTGCAGTTTGTAAATTTACATGATGGTGGACAGAAATATGTTGAAGCTGTAAATGGAATTGCTGACAGGATTAGTGCCAAACTCACAAATAAAGGGAGTATTACAAGTGCAGGTTCTACTCAAAATTCTGATTTGGGCGGGATAGAGGCTCCTGATGGCACAAATGCTGCTCAAGTAGATGTCAACGGCCCTCCTAAGTCCAACACTTTATCACCCGATATGAGTGTTGCCACATCTTATGACGTTACTACTTCAAACATTATGGTTTCTGAGCCTGTTGAATCAATATGCCCAGATATTTCTGCAGTTTCATTGGGCATACCTGTGGCTAATCCAGGTCCAACTCACACTCTACCTTTCCAGAATGAGGTTGAGGTAGAAAAGTCTCCACCCACTGCTTTTTCCCAGCAGCAATTTGGGTCGCATCAGTCTGGAATGGAAATCCAGCCATCTGCGCCTATGCAGGCTTTCGTTGATCCTCGACAGGAACTTGTGAACCATGCAGATTATGTCCAGATGCCTGCCCATATAGGATTCCCAAGTTCCCAGCTTATAGGTAGGCCTGGAACTATCTACTCTCAGCATCATTTTCATGATCATACTGCTGGTTATGTATCCCCACGGGTAATCCCTGCAGTGCAGATGACAATGGCTCAGCCATCATCTCATGCCGGTATAAGACCGTGTGTTATTCAACCACGACCAGTCATGCAAGGACAACCGATCGGTTTTGAGCAATATTATGATGAAAATACTTCAGGGCTAAGGATGCACCACCAGCTTCATGCTGAGCAAAGTTACAAAGCATATCCACATCAAGTCCCTTTCGGAGGTAATTATGGTTGGGTTCAGGTTTCTCCATCGGAGCATGTTATTTTTCATGATGGATTGTTACCTCAACAACCGGTAGGGGTGCCTCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAACTACCTCATGCACATTCAGATCCAGTGGTACAGGATCAGCATAGTGCAGGTTTAATTCCTGATTCAATGCCAAGCTACAATAGTCTTCCAGTTGAGGTTACTTTAAGACCTCAACCAACAAATAGGGTTTTGGTGACTGCACCAGTGAAGGAAGGCAATCTTAATGTTGAACAAGCAGTTGGGACTAGACCCAGGGTCATCATACCTTGTAGTGACACAAGTAGTCTTTCTGTGGAGGCTGAAGGTGAGAGAAACTTTATAGTGGATAGGCCTGATCTTCCCAGAAACGCAGTAGTTATCCCGGAAAATGTGGGAAGAACAGGTGAAAAACAGTCGTCACAGGATGGGCTGACAGGAACAGCGCCACCGTCTTATCTAGATGATTTTGGCAGCCAGCACATGATGCCAGTTGAAAACTTGGCCAAAGAGGACGTGGTTGTGAATAAGCCTGTTAACGAAATACCTTTAGTTGGTGGCACATCTGTTGAAACTTCTGAGAGCATGGTTCAAGGATCATCAACAGAAAATACCAATGAGCTTGCTAGTACAATTTCAAAAGCAGATGCTGTGGAGAATTGGATTGCACAGGACCTGCTCAAACATATCGATGGAAGAATGGACAACCTCAAGATAAGCAACCCTGAAACTTTTGTAAATAATGATAATTTTGATTACAATACTCAGCATGCTATAGAGAAGCAAGATTTGGTTATGGATAACAACACTGGCAGGTCAAAATTGATTGCTGATGGAAATCAAATTAAGATGATGGGTACTCTTCCTAACTCCAATGTAGAAATTGCGTATGGTAATAATTCTACGCAAGTGGAGTACAATGAGGCTGCACACCCACCCGTTTGGGGCATTCCTGGAGTAAGTCCTCAATCTAAGAATGGAGTCCATCAGAAGGATGAAGCAGTTTTATCTTCAATTTCGCAATCTGTTGGGTTTGGACATTTGCAGGATTCTTCAAACTCACTTTTTAGCAATCAGGATCCCTGGAATCTACAAGGCACTTACTTTCCACCACCTAGACCGGACAAAGTCACATCAAAAAAAGAAACCTATTCTTTTATTGACCAGTTTGGTGAGAATTCAGGCAACGGTGGTGAACACAAGTTTGATGCTCAATTGGATGGCGGTCTCTGTCAGACATTCAAACAAAATTCAACATTAGAAGAAGCTCGATATGCCCAGGAAGAGCAACAACTTCAAGCTGTTGCTGAAAGTTTAGCTGCATCCGTTCTGCACTCAAGCACTTCAAATCCTGACTTACATGCCCGAGATGTATCCCATCATGAAGACACTGAGGATGGAGATGTTCGAAATAATATACTAAATATACAGTGTAGAGAAAAAACTCAGGATGACAAAAGCAAGCTTTCAGAGAAGGCAAATTTTGGCTTTCCAGCATCAGATGTTGGAGCGTTACAGATTATAAAGAATAGCGACCTTGAAGAGCTAGTAGAATTGGGATCTGGGACCTTCGGGACTGTGTATCATGGAAAATGGAGAGGTACTGATGTTGCAATAAAGCGGATTAATGATAGGTGTTTTGCGGGAAAGCCTCCAGAACAAGAACGCTTGAGAGCTGATTTTTGGAATGAGGCAATCAAGCTTGCTGACTTACACCACCCAAATGTGGTAGCTTTCTATGGTGTCGTTCTTGATGGCCCAGGAGGTTCCGTGGCAACAGTAACAGAGTATATGGTTAATGGTTCTCTAAGAAATGCCTTCGAGAAGAATGGGAGGAATGTTGACAAGCGCAAGCGTCTTATGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTCCATGGAAAAAACATAGTCCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGTGATCCACACCGCCCAATATGCAAGGTTGGGGACTTGGGCCTGTCCAAAGTAAAATGCCAGACTCTAATATCCGGTGGTGTTAGAGGAACCCTACCTTGGATGGCACCTGAACTGCTGAATGGGAGTAGTAGCCTTGTTTCAGAAAAGGTTGATGTGTTCTCATTTGGTATTGTCATGTGGGAACTGCTTACTGGAGAAGAGCCGTATGCCGATTTGCACTATGGGGCCATAATAGGTGGCATTGTGAGCAACACTCTGCGGCCTCTAGTTCCAGAATCTTGTGATCCAGAATGGAGAGTGGTGATGGAGAGGTGCTGGGCTTCAGAACCATCAGAAAGACCTTCATTTACAGAGATTGCCAATGATTTACGTTCCATGGCTGCCAAAATCTCCCCCAAAGGACAAAATCAACAACAACAACCTACTTCATCTCAGACTCAAGTGCAGAAGTAA 4170 0.4448 MAFDQNSSPGDMRPPPPPNVVRSEEPPLVLPVTTAAVRDNGASGGVPVYYPDGGLAGVGYGNVASGGGGGAASTTWCIRPGVPHPLPHPALNPTVGFSFPSRVAGGNAGDISGSFVATANGYPLNSGNWVTGNGLDNNNLQSGRVIANGDDRAGGAGLIGSRSSPPASQRVDENGRDDSVSGRKMKFMCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVSFNDLAQKMVNTFGQPVVIKYQLPGEDLDALVSVSCADDLDNMMEEYERLIERSSDGSPKLRVFLFSALEFDPSGVLQFVNLHDGGQKYVEAVNGIADRISAKLTNKGSITSAGSTQNSDLGGIEAPDGTNAAQVDVNGPPKSNTLSPDMSVATSYDVTTSNIMVSEPVESICPDISAVSLGIPVANPGPTHTLPFQNEVEVEKSPPTAFSQQQFGSHQSGMEIQPSAPMQAFVDPRQELVNHADYVQMPAHIGFPSSQLIGRPGTIYSQHHFHDHTAGYVSPRVIPAVQMTMAQPSSHAGIRPCVIQPRPVMQGQPIGFEQYYDENTSGLRMHHQLHAEQSYKAYPHQVPFGGNYGWVQVSPSEHVIFHDGLLPQQPVGVPQRVEDCYMCQKKLPHAHSDPVVQDQHSAGLIPDSMPSYNSLPVEVTLRPQPTNRVLVTAPVKEGNLNVEQAVGTRPRVIIPCSDTSSLSVEAEGERNFIVDRPDLPRNAVVIPENVGRTGEKQSSQDGLTGTAPPSYLDDFGSQHMMPVENLAKEDVVVNKPVNEIPLVGGTSVETSESMVQGSSTENTNELASTISKADAVENWIAQDLLKHIDGRMDNLKISNPETFVNNDNFDYNTQHAIEKQDLVMDNNTGRSKLIADGNQIKMMGTLPNSNVEIAYGNNSTQVEYNEAAHPPVWGIPGVSPQSKNGVHQKDEAVLSSISQSVGFGHLQDSSNSLFSNQDPWNLQGTYFPPPRPDKVTSKKETYSFIDQFGENSGNGGEHKFDAQLDGGLCQTFKQNSTLEEARYAQEEQQLQAVAESLAASVLHSSTSNPDLHARDVSHHEDTEDGDVRNNILNIQCREKTQDDKSKLSEKANFGFPASDVGALQIIKNSDLEELVELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPPEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNAFEKNGRNVDKRKRLMIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPLVPESCDPEWRVVMERCWASEPSERPSFTEIANDLRSMAAKISPKGQNQQQQPTSSQTQVQK 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01365 1389 CDD PB1_UP2 188 286 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 154 179 - -
Vivi4g01365 1389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1187 1378 - -
Vivi4g01365 1389 SMART PB1_new 199 288 IPR000270 GO:0005515
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 1366 1389 - -
Vivi4g01365 1389 Pfam PB1 domain 204 286 IPR000270 GO:0005515
Vivi4g01365 1389 SUPERFAMILY CAD & PB1 domains 200 288 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 1033 1053 - -
Vivi4g01365 1389 CDD STKc_MAP3K-like 1105 1362 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 718 739 - -
Vivi4g01365 1389 PANTHER SERINE-THREONINE PROTEIN KINASE 229 1364 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 329 344 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 10 24 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 356 370 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 720 734 - -
Vivi4g01365 1389 Gene3D Phosphorylase Kinase; domain 1 1092 1186 - -
Vivi4g01365 1389 Gene3D Transferase(Phosphotransferase) domain 1 1187 1389 - -
Vivi4g01365 1389 SMART serkin_6 1099 1368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g01365 1389 ProSitePatterns Protein kinases ATP-binding region signature. 1105 1136 IPR017441 GO:0005524
Vivi4g01365 1389 Gene3D - 205 288 - -
Vivi4g01365 1389 PRINTS Tyrosine kinase catalytic domain signature 1218 1236 IPR001245 GO:0004672|GO:0006468
Vivi4g01365 1389 PRINTS Tyrosine kinase catalytic domain signature 1289 1311 IPR001245 GO:0004672|GO:0006468
Vivi4g01365 1389 PRINTS Tyrosine kinase catalytic domain signature 1181 1194 IPR001245 GO:0004672|GO:0006468
Vivi4g01365 1389 PRINTS Tyrosine kinase catalytic domain signature 1333 1355 IPR001245 GO:0004672|GO:0006468
Vivi4g01365 1389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1092 1186 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 329 370 - -
Vivi4g01365 1389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1224 1236 IPR008271 GO:0004672|GO:0006468
Vivi4g01365 1389 Pfam Protein tyrosine and serine/threonine kinase 1103 1362 IPR001245 GO:0004672|GO:0006468
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 1369 1389 - -
Vivi4g01365 1389 MobiDBLite consensus disorder prediction 1 24 - -
Vivi4g01365 1389 ProSiteProfiles Protein kinase domain profile. 1099 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g01365 1389 SUPERFAMILY Protein kinase-like (PK-like) 1092 1362 IPR011009 -
Vivi4g01365 1389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 204 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01365 Vivi-Chr4 48097705 48107257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01365 183 626 MAP Kinase Kinase Kinase AT3G46920 40.733 7.96e-78 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vivi4g01365 PK_Tyr_Ser-Thr 1.8e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01365 - - gmx:100776264 1806.96