Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01337 ATGGAATTCGGTACAGTTGATGAAGCTAATGTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGACAAGATCGACTGAGGATGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACACGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGATAGTTATGTAGTGACATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTGTCCACTTACACCCCATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAAATTGACGGTCTACAGTCAAATGGAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACGATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTAATATTAAAGATGGTGACGTTGCCGCTGCTATAAATTATCTAACTGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGACATGGATGGACGAATGAAGTCTCTTTTTTGGGCTGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTGATTGCGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGCTGCGTTGGTGTCAGATGAAACGACAGAGACGTATAAGTGGTTGTTGGAGTGTTTTTTAGAGTGCATGGAAAATAGATACCCAGCAGTAGTTGTAACAGACGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACATCGTTTATGCGCTTGGCATTTGAACAAGAATGCGTCTGAGAATGTAAAGAACTCGGCATTTTTGAAAGATTTTCAAAAAGCCATGTACTCTAATTTTACAAAGGATCAATTTGAAGAGTTTTGGTCAAAAATAATTAAAGAAAACGGACTTGAAGGAAATCCTTGGGTTGCAAAAACGTACGAGAACGGGTCACTATGGGCAACTGCATATCTACGTGAGAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCCGTCAATGCAGTCATCAAGAGTTATGTCAGGAAGAAAGGCTGCATTTTTGAATTTATGCACAATTTTGATCAGGCTATGAGATCTTATAGAAACAATGAACTGATTGCCGATTATAAATCAAAGTTTTCAGAACCTGTGATGACTACTCAACTGCGTGCCCTTGAGAGCCATGCTGCGAATGTTTATACTATGGAGATTTTCAAGGAAGTCAGAGATGAAATAGTGAAGGCTGGATCATTGATTGTTAAGGAAAAGTTAATTCGCAACGGATTTAAGACTTATCGATTTACAAAATATTGTTGTGATAACTATGACGTAGAGGTTGTGTATGATGGTGAAACACTTCAATGTGAGTGTAGGTTATGGGATTCTCATGGGATTCCATGTTCTCATATGTTTGGTGTCATGAAGGAAGAACATGTTAGTCTCATTCCCACCGGTTTGATTTTGTCGAGATGGACGAAGGATGCAAAAATTCAGTACTTGAACATGAATTGTAATGGTTCTGATGATTCTAAAATGATTGAGCTAGCTCGGTTTGGTGCATATTGTTCTGCATTTACTGCCTTTTGCAATGAAGCTTCAAAAAGGGAAGGTGTTTATGGGGAAATAATGGGTGACATTCTGAAGTTACACAAAAAGTATTGCAGTACGGACGATCCTCTTTTGGCATCGAACTCAGTTGTAGGTGATCCAAATATTGTGAATAGCAAAGGTGCTCCAAAGAAAAGAAAGAATGACATAAAATCTATTAGGCGATGTTCTAAATGCAACAGTAGAACTCATAATGCAAGGAGTTGTTCGGTTGCGGAAAACGCGCCATCTGAACAAAATGTTGGTATGACGTCGCGGCCAGTAACTGATTCATTCAGCCAGGTTGTGAAGAATAATTTGTTTGTTAAAACAGAACAAGAATGGAAAAAGAGGTCGCATTGGTGGAAGTAG 2136 0.3919 MEFGTVDEANVFYFKYAKCKGFAIRKSDVRTRSTEDGQTIIMRQFVCNKHGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKDSYVVTCFEEAHNHELTPSRFVHLHPIYREITAADRAQIDGLQSNGIRTCHIMGYMVAQKGGHDRVGFTKKDLYNYFDSKMRANIKDGDVAAAINYLTVKSSTDPMLYGKYAVDMDGRMKSLFWADGSSRSDYFCFGDVIAFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGAALVSDETTETYKWLLECFLECMENRYPAVVVTDGDGAMRESIKQVFPDATHRLCAWHLNKNASENVKNSAFLKDFQKAMYSNFTKDQFEEFWSKIIKENGLEGNPWVAKTYENGSLWATAYLREKFFGRIRTTSQCEAVNAVIKSYVRKKGCIFEFMHNFDQAMRSYRNNELIADYKSKFSEPVMTTQLRALESHAANVYTMEIFKEVRDEIVKAGSLIVKEKLIRNGFKTYRFTKYCCDNYDVEVVYDGETLQCECRLWDSHGIPCSHMFGVMKEEHVSLIPTGLILSRWTKDAKIQYLNMNCNGSDDSKMIELARFGAYCSAFTAFCNEASKREGVYGEIMGDILKLHKKYCSTDDPLLASNSVVGDPNIVNSKGAPKKRKNDIKSIRRCSKCNSRTHNARSCSVAENAPSEQNVGMTSRPVTDSFSQVVKNNLFVKTEQEWKKRSHWWK 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01337 711 SMART 26again6 512 539 IPR006564 GO:0008270
Vivi4g01337 711 Pfam FAR1 DNA-binding domain 12 104 IPR004330 -
Vivi4g01337 711 Pfam MULE transposase domain 226 320 IPR018289 -
Vivi4g01337 711 PANTHER OS01G0519700 PROTEIN 1 668 - -
Vivi4g01337 711 ProSiteProfiles Zinc finger SWIM-type profile. 501 537 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01337 Vivi-Chr4 45736785 45739079 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi4g01337 MULE 2.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01337 - - vvo:131620026 1273.46