Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01235 ATGTTAACTCTGAAAGGAGGAAGCAGGCCACCATGGGTAGGATTAGGAGCAGCAGTCTGGGTTCAAATAGCGTCAGGAAACACTTTCACTTTTCCTCTGTACTCACACTCTTTGAAATCTGTTTTGGGTTTTAATCAAAGACAAGTTACACTTCTTGGTGTTGCTAATGATATTGGAGAAAACGTTGGGTTGCTTCCCGGGATCGCTTGTAATAGGTTCCCGCCTTGGTTGATTCTTTCGGTTGGTGCGCTTGCTTCTTTTGTTGGGTACGGTGTTCTTTGGCTTGCTGTTACCCAAACAGTTACTAATCTTCCTTACTTACTGCTTTGGTGTGCCCTTGTTGTAGCTTCCAATAGCAGTGCATGGTTAACCACCTCGGTTCTAGTAACCAACATGAGAAATTTCCCAGTTAGTCGAGGCAAAGTTGCGGGAATCCTGAAAGGTTATGGAGGGCTTAGTGCTGCAGTTTTCACTCAAATTTACAGCCTACTGCTTCACGACAATTCTTCTAAGTTCCTCATGTTACTGACGATCGGTATTCCAGCCGTTTGTTTGAGTATGATGTTTCTTGTTAGGCCTTGTACACCAGCTTTGGATGAAGACTCCACATCTAGTTCTCATTTTATCTTTATCCAATGTGCTAGTGTTGTCTTGGGTGTATATCTTCTTTCAACCACTATATTTGGCAATCTTCTTACATTAAATGGTACAGTTTCGTATATTTTGGTGGCTGTGATGGTTCTTCTTCTCATGGCTCCAATTGCTGTCCCTGTAAAGATGACATTGTATCCTAAAAGAGTTTCAAATTCAGAGCAACCACTTGGATCTTCAGACTCTCTCGGTCAAGGAAAAGATGACAAAATGGAGCCGTTGCTAGGATCTTCGTCAACAGGAGCCCTTGGAAGCTCGAACGATGATGATTCGTCTGAGGTAGCTATGCTTCTTGCATTAGGTGAGGGAGCAATAAAGCAGAAGAAGAGAAAGCCTAAACGTGGAGAAGATTTTAAGTTTACTGAGGCTATAGTAAAGGCTGATTTCTGGCTACTATTTTTTGTTTATTTTGTCGGTGTTGGCACCGGAGTTACTGTGCTCAATAATCTAGCCCAAATAGGTATTGCACAAGGTGAAGAAGATACTACAACTTTACTGTCGATTTTCAGTTTTTGCAATTTCGTTGGTCGGCTTGGTGGAGGAGTTGTTTCAGAGCATTTTGTCCGGACCAAATTGCTCCCAAGGACATTCTGGTTGACATGCACACAGACAATCATGATATTGGTATATCTTCTATTTGCCTTTGCTGTAAACGGAAGCCTTTATCCCGCGGTTGCATTTCTTGGTGTCTGCTACGGCGTGCAAGTTTCCATAATGATCCCTACCGTTTCCGAGCTTTTCGGTTTGAAGAACTTTGGCGTATTGAGCAACGTCATGTCATTGGGTAATCCACTTGGGGCAGCCATTTTCTCAGCTCTGCTAGCAGGTTACATATATGACAAAGAGGCAGCAAAGCAGCACGGTCTCAGTCTGCACGGTCTTAACCTTCTTGCTTCTGAAGTTTCTTGCATCGGCGCAGATTGCTTTAAGCTGACATTTTTCATTCTCTCTAGTGTGTGCGCTGCCGGCATCATCTTGAGCATCATTCTGACTCTGAGAATTAGACCTGTTTACCAAATGCTTTATGCTGGAGGATCTTTCAGAATTCCTCAAACATCTTCTAGTACCTAA 1722 0.4303 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNRFPPWLILSVGALASFVGYGVLWLAVTQTVTNLPYLLLWCALVVASNSSAWLTTSVLVTNMRNFPVSRGKVAGILKGYGGLSAAVFTQIYSLLLHDNSSKFLMLLTIGIPAVCLSMMFLVRPCTPALDEDSTSSSHFIFIQCASVVLGVYLLSTTIFGNLLTLNGTVSYILVAVMVLLLMAPIAVPVKMTLYPKRVSNSEQPLGSSDSLGQGKDDKMEPLLGSSSTGALGSSNDDDSSEVAMLLALGEGAIKQKKRKPKRGEDFKFTEAIVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKLLPRTFWLTCTQTIMILVYLLFAFAVNGSLYPAVAFLGVCYGVQVSIMIPTVSELFGLKNFGVLSNVMSLGNPLGAAIFSALLAGYIYDKEAAKQHGLSLHGLNLLASEVSCIGADCFKLTFFILSSVCAAGIILSIILTLRIRPVYQMLYAGGSFRIPQTSSST 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01235 573 Gene3D MFS general substrate transporter like domains 12 205 IPR036259 -
Vivi4g01235 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 556 - -
Vivi4g01235 573 MobiDBLite consensus disorder prediction 268 287 - -
Vivi4g01235 573 Gene3D MFS general substrate transporter like domains 341 555 IPR036259 -
Vivi4g01235 573 Pfam Nodulin-like 11 258 IPR010658 -
Vivi4g01235 573 CDD MFS_Mch1p_like 10 541 - -
Vivi4g01235 573 SUPERFAMILY MFS general substrate transporter 15 197 IPR036259 -
Vivi4g01235 573 SUPERFAMILY MFS general substrate transporter 221 553 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01235 Vivi-Chr4 39939850 39943004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01235 2 570 Nodulin-like Gene Family AT1G80530 55.245 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01235 - - gmx:100794012 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01235 4 39939850 39943004 Vivi4g01235 4 39939850 39943004 ECH
Vivi1g01466 1 30661216 30664542 Vivi4g01235 4 39939850 39943004 PCT