Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01121 ATGCTTCTGAAGTTTGGGAAAAAGAGTCACAGCCCGACTACACGCAACACGGAAACAGATAATGTCAGTGTTGATGGTTCTGAGCTTCTTGCTCGTTTTCACTGCTATCGCCATTTCGAAAGAATAGTGAAAAAAAGATACAAATGGCTTGATAAAGTGGACGTTGTTATTGGTAAGGTTGATGCAGTCACAAGCTTTGATATATATTTCATATATGCCTATCCTCTTCTAACGGTGGAAGAGTTTCAGAAAGGGCATGTGGATTCAGACAAGATCATTAACATTGCATACATGTTTAATACACCCGAGGGGAGGGTGAAGAACCCAGATTTTCTGAAGGAGGTTTTGTCTCTTTGCAAGAAAGAAGATCATCTCATAGTGGGTTGCCAAAGTGGAGTGAGATCTGTATATGCAACTGTTGATCTTCTGGCTGAAGGGTTTAAGGATGTCTCCAACATGGGTGGAGGTTATCTGGATTGGGTTAAAAAGGAATTTTCTGTCAAGATACATGTCACTAAATAG 522 0.4042 MLLKFGKKSHSPTTRNTETDNVSVDGSELLARFHCYRHFERIVKKRYKWLDKVDVVIGKVDAVTSFDIYFIYAYPLLTVEEFQKGHVDSDKIINIAYMFNTPEGRVKNPDFLKEVLSLCKKEDHLIVGCQSGVRSVYATVDLLAEGFKDVSNMGGGYLDWVKKEFSVKIHVTK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01121 173 MobiDBLite consensus disorder prediction 1 21 - -
Vivi4g01121 173 PANTHER THIOSULFATE SULFURTRANSFERASE 18 78 169 IPR044684 GO:0003824
Vivi4g01121 173 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 67 163 IPR036873 -
Vivi4g01121 173 Pfam Rhodanese-like domain 80 162 IPR001763 -
Vivi4g01121 173 ProSiteProfiles Rhodanese domain profile. 80 169 IPR001763 -
Vivi4g01121 173 SMART rhod_4 48 166 IPR001763 -
Vivi4g01121 173 CDD RHOD 78 161 - -
Vivi4g01121 173 Gene3D - 39 168 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01121 Vivi-Chr4 34717173 34721940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01121 78 169 Sulfurtransferasese or Rhodanese AT2G17850 58.696 7.91e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01121 - K15692 vvo:131597030 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01121 4 34717173 34721940 Vivi4g01121 4 34717173 34721940 ECH
Vivi4g01121 4 34717173 34721940 Vivi4g02913 4 136144081 136149514 PCT