Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01065 ATGGAAGATAAAACTTCAACAAAGATATTTATGAAAATTGATGAAAGACCATCATCATCATCATATGAACATGGCAAAAATAGAGATTCAGAAAACAACTCATCCCTTCAAAATAATACACCAGGATCTCCACTTTTATTAAGTTTGAGTCTTAATAACACAACACAACATCCTCATGAAATTCAAGGAAAGTCCCAAATCCAAATTGGGGAGCTTAGAGTAAAGCTTGAGGAAGAAAAGAAGGAGAATGAAAATTTAAAAGTGATGCTAAATCTGGTCAACGAACGATGCATTGTTCTTCATAATCGATTACTTCTGCATCAATTATCTTCATCACCTCAAAATAATCACAACTTGCCGAATGGAAATATACAAGATGAGGAGAAACCGGTGTTCCCTACTAGGCAGTTCTTGAATATTGATGAGCCTTCCTCTTCAGATTGTGGCAAAAGAGAAAAATTTGCTTCATTAGAAAACAATGTGAATGTTAACATTGGAAGAAACTTTGCATATGAGTGCATTAATAATATTCATGAAGGTGACATAATTAGCAAAAGATTAGAGGATCAAGTATCTGAGGTTGAATGCAGGAGAGCTAGAGTGTCTATAAGGGCACGATCAGATTTTTCTTTGATGGTAGATGGATGTCAATGGAGAAAATATGGACAAAAGACGGCTAAGGGAAACCCTTGTCCTCGAGCCTACTATCGTTGTAGTATGGGAACTTCATGTCCAGTTCGTAAGCAGGTGCAAAGATGTTTCAAAGATGAAAGTGTTTTCATCACAACCTATGAAGGGAACCACAACCATCAACTTCCACCCTCAGCCAAACCAATTGCAAACCTAACCTCATCAGCACTCAACACATTCCTTTCAAACTCAACCACAAATCTACAATATGGAACCAATATATCCAACACATTCCTCTTCTCTTCACCATTATCTCCACCAAACTCAAATGCTATAGCTACTTTCTCTCCTTCTCCAACATGTCCTACAATAACACTTGATTTTACACTCCCTCCAAGTAACTATTTGCAGTTCAAAAACCACAAACAATCATCATTGTTTTCTTTTCCATTTCAAGGTTATAGTTACCCTCAATCATTTGAGGTGTTTCCAAATATGATAAACAATGAGAGAAAACTTGCTTTGGTTGATGTTGTGAGTGAAGCTATAGCAAAAGATCCTACTCTCAAGGCAACATTGTTTGCTGCCATGTCATCATTCACAAATGGAGATCCTTTCAATGTTAATAACCAGGGCCAACAACTTAGTAAGAGTGGTTAG 1290 0.3674 MEDKTSTKIFMKIDERPSSSSYEHGKNRDSENNSSLQNNTPGSPLLLSLSLNNTTQHPHEIQGKSQIQIGELRVKLEEEKKENENLKVMLNLVNERCIVLHNRLLLHQLSSSPQNNHNLPNGNIQDEEKPVFPTRQFLNIDEPSSSDCGKREKFASLENNVNVNIGRNFAYECINNIHEGDIISKRLEDQVSEVECRRARVSIRARSDFSLMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGTSCPVRKQVQRCFKDESVFITTYEGNHNHQLPPSAKPIANLTSSALNTFLSNSTTNLQYGTNISNTFLFSSPLSPPNSNAIATFSPSPTCPTITLDFTLPPSNYLQFKNHKQSSLFSFPFQGYSYPQSFEVFPNMINNERKLALVDVVSEAIAKDPTLKATLFAAMSSFTNGDPFNVNNQGQQLSKSG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01065 429 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 64 421 IPR044810 GO:0003700
Vivi4g01065 429 MobiDBLite consensus disorder prediction 31 50 - -
Vivi4g01065 429 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g01065 429 Pfam WRKY DNA -binding domain 214 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g01065 429 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g01065 429 MobiDBLite consensus disorder prediction 1 50 - -
Vivi4g01065 429 Gene3D WRKY domain 197 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g01065 429 SUPERFAMILY WRKY DNA-binding domain 206 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g01065 429 Coils Coil 69 96 - -
Vivi4g01065 429 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01065 Vivi-Chr4 31988424 31995089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01065 64 339 WRKY Transcription Factor Family AT4G04450 38.291 1.28e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi4g01065 WRKY 9.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01065 - - vvo:131599031 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01065 4 31988424 31995089 Vivi1g00890 1 19112962 19117800 PCT