Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00991 ATGGAAAGAATGTTCCCTACAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACCACCGACCCGAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAACTTGGAGGACCTGACAAGGCCACTCCTAAAACTATTATGAGGGTTATGGGTGTCAAGGGTCTCACTCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTAGGAAAGCAACCCCACAAAGAATTCAATGATCACTCAATTAAGGATGCTTCAGCTTTAGAACTGCAACGAAATACTGCTTCCTCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAAAGAAGGCTTCATGAACAGCTTGAGGTGCAAAAACATCTTCAACTAAGGATTGAAGCTCAAGGAAAATACATGCAAAGTATATTAGAGAAGGCTTATCAAACCCTTGCTGGTGAAAACATGGCAACAGCTACAACTAACCTAAAGGGTGTAGTTATTGGACCTCAAGGGATTCCAGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTCTCATCTTTTCAAGATCTCGACCTTTTCGGAAACAACGGCGGCGGCGATCAACTCGACCTTCAACAAAACATGGAAAAACAAACCCTAGATCATCATGGATTCATCCAAATCAATGATAACCTATGTCTTGGCAAGAAGAGGCCAAACCCTAACACTAACCCTTACAATGGAAATGGAAAGAGTCCTTTAATGTGGAGTGATGATTTAAGGCTTCAAGACTTAGGACCAGCTTCATCATGCTTGGATGATCCTTTCAAAGGTGATCAAATTCAAATCCAAATTGCACCACCATCATTGGATAGAGGAAACGATATCGAAACTATCGATATTTACGATACAAAGCCTTTACTTCAAGGAGAGATTCTAGGCGAAAAGAAATTCGACGCATCGATGAATACTAAACTCGAAAGGCCATCACCAAGAAGAGGCCAACAACAACAGCTTCATGCTGAAAGAATGAATAATCCTATGATTAGTACTGGCATCATGGCACAAGGTAGAGGATCACCATTTGGATGA 1134 0.4136 MERMFPTKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMATATTNLKGVVIGPQGIPEMGLLKEFGSPLSFSSFQDLDLFGNNGGGDQLDLQQNMEKQTLDHHGFIQINDNLCLGKKRPNPNTNPYNGNGKSPLMWSDDLRLQDLGPASSCLDDPFKGDQIQIQIAPPSLDRGNDIETIDIYDTKPLLQGEILGEKKFDASMNTKLERPSPRRGQQQQLHAERMNNPMISTGIMAQGRGSPFG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00991 377 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Vivi4g00991 377 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Vivi4g00991 377 MobiDBLite consensus disorder prediction 1 20 - -
Vivi4g00991 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Vivi4g00991 377 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Vivi4g00991 377 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Vivi4g00991 377 FunFam Myb family transcription factor 34 92 - -
Vivi4g00991 377 Gene3D - 34 92 - -
Vivi4g00991 377 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 182 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00991 Vivi-Chr4 28480872 28483560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00991 4 377 G2-like Transcription Factor Family AT1G79430 57.254 3.08e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi4g00991 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00991 - - gmx:100807793 564.303