Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi4g00927 | ATGCAGAAACATCCATACAATTCAATGGAGCCTCGAAAGGAGGAATTCCATTCTGCACCGCAACCGGTCCTACAAGAGCATCTGGACGGCATGCATGCCAATACAAGGCCTTCTCCTTCCTTTAACGTGTCGGAGAATAAACCTGTACATAATTTCTCCATACAGACGGGTGAGGAGTTTGCTCTTGAGTTCATGAGGGACAGGGTGAATGTGAATCTCAAGAAGCCTTCGTTTCCGAATGTTGTCGGAGATCCTAATTACTCGACAGGGTATATGGAATTTAAAGGCCTTTTAGGCCATAAAGGATCAGAGAGTGGTTCCGATGTTTCTATGCTTGCAAGTATTGAAAAAGGTCCGAAAGAGTTTGACAGAAGGAATTCTGCTTTACATCAGGAAAGAAGTAATTATGGCTCAGGGCGATCGATTCCTAGAACATCGTCTACTAATCAAGATAACAACCGAGTCCTGCACGGTATTTCTTCTTCTGGATCTTCTGACAGCTTATCGCGGATGAAGATTCTATGCAGTTTTGGTGGTAGAATATTACCGCGGCCGAGTGATGGAAAGCTTAGATACGTCGGGGGTGAAACACGGATCATTAGCATTAGAAAGGACATAAATTGGCCGGAGCTTATGCAGAAAATATCATCAATCTATAATGAGACTCGAGTAATAAAGTATCAGCTCCCCGGAGAAGATCTTGATGCCCTCGTTTCAGTAACGTCTGACGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAAGAAGAAGAGGATCGTTAAAGCTTCGGATGTTCCTGTTCTCGATAAATGATTTGGATGATACTCAGTTTGGTCTCGGTAGCATGGATGGTGGTGATTCCGAAGTCCAGTATGTAGTTGCTATTAATGGCATGAATGTGGAATCAAGAAGCAACTCTATACTTCGTTTTGCCGGAAGTTCTAATGATATACAGGAATTAGACCGACAAACTATTGACAAGGAAACTAAAAGAGCTGTGGTTGAATCGTATGGTGTCGGCAGTTCTTCCTTGAGTGGAAATGTTAACCCAGTATTGACAAATCAGTCTTCGCAACCAGTGCTACCAACATCCTCAAATGCTTATGAAGCCTATCCATTCTTTTACGAGGATCCGATCATTCAACAAGGAGGAACTAGTCAATATCCAATACATAATGGCCCTTTTCCCTCTAACAGTTCGGCTCGCAATCTAGCAGATGCTCCGGTTTCTTTGCCTACGTTCGGCGTTGCGAACCAAGGAATCACGAGCGAAGGACAAGCAATGGCATCTGGTGAGTTGCATGTACAAAGTTCTCTTCCTTCGCGTCCATTTGAGGGAGGCTTGCAAGGTAATTTATCCGAGGCGCCAGTTCCAGTGGCTGTATCAGAAGCACTTCATCCTGCAATGCCATTAGAAAACAAGATTTCAACTGCGGAATCAGAAGTGCTGAATCCTATACAGATTTCAAGATCCGGTGAAGATGACTTCTATCCTGCGTCCACAGACGCATTCAGTCGTGCTCTTGTCGATGCTGAATCCAATATAATCGATTTTAGTTGCCTTGAACCGCCTCCGCTTCCTAATAGAGTGTATTATTCAGAGAGAATTATTCCCCGGGAACATGCAGATTTGTTGAACCGGTCTGCAAAGTCAGACGATGCATATGGTTCGCACTTACTCATGGCAGATTTACTTTCTGATTTGAACCGTATGAACTCAGTTAGCGAAACCAGTGACATGTTTCACAATGAGAATCTGTCGAATCTGAACACGGTGTCGAACTCATCGGCAAAGCCTGTGCGTGGAGATGGCCATGCCATCAGCAGCAAACATTTGCCTGATGCAACAAGTCAGGTGAACCCAAAGTTATATCAGCTTGCGGATTCAGATTTGAAGCCGGTATTGTCAGATAACAAAATCTCCGAAAATGAGACAAATACCTCCAAAGATAGTCATAAAATTCTTCCAGCTGATGAAACCAAGAGCACTGAGAATCTTGCTTTTCGCCGAGTTCCTTCTGTTGAACATAACGAGAATCTAACATCTAAACTTCAAGATCAAAATTTGTCTGAGGCCCCTACAAGGGAACCTCTTGATGCTAAATCCAAACCTTCTCAGGGTGACATTCTGATTGATATCGAAGACAGGTTTCCACGTGATTTCCTTTATGATATGTTCTCGAAAGCAGTTCATTCTGAAGATTCCGCAAACATTAGTCCATTGCCAGCTGATAGAGCAGGTTTGAGCTTGAAAATGGACAATCATGAGCCTAAAAGTTGGTCATATTTTCAGAAGTTGGCACATGAAGGGTTTGATAATGTTTCTCTAATCGATCAGGACAATATCGGGTTTTCATCAGCTGTAAGCAAAGTAAAAGAAGGAGATAGTAAGTTCAATATTTCCGCTCCTCCACCAGCAGACGTTATTGTTTTGACAGGACCCAAGGAATCTCATTCCAACATAAATTTTGGACAGGAAAATCAGAATTCCTTACCTGTAATTACTAAAAGCGAGGCTATTGTATTTCAACCAGAAAACAACCATTCGGAACTTAAGGCAAATGAAAATAAGAACATCAACGCCGCCCCAGTGGAAAACATTCGGCCACAAGAGTCTGAATATCAGGATGGCAATAATGAGGCAAGAGATGTGGCTGTAGCTCCTCAAGATATTAGTTTTGACGATTTTGACATTAGTACTTTGCAGATCATAATGAATGCGGACCTTGAAGAGCTGAGAGAACTTGGTTCTGGCACTTTTGGGACTGTGTATCATGGAAAGTGGAGGGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGTTGTTTCTCCGGCCGGTCTTCAGAACAAGAAAGACTGACGATAGAGTTCTGGCGAGAAGCTGACATACTTTCTAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGCGTGGTGCAAGATGGACCAGGAGGAACAATGGCAACTGTTACGGAGTTCATGGTGGATGGTTCTTTACGACATGTTTTGTTACGAAAAGATAGATACCTTGATCGCCGCAAGAGGCTAATAATTGCCATGGATGCAGCATTTGGAATGGAATACTTACATGCAAAAAATATTGTTCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGCGACTTCGGCCTGTCAAAAATCAAGCGGAATACCCTGGTGACCGGTGGTGTGCGTGGAACTCTACCGTGGATGGCACCAGAGCTGCTGAATGGGAGCAGCAATAAGGTTTCAGAAAAGGTTGATGTATTCTCCTTTGGGATTGTATTATGGGAGATTCTTACTGGTGAGGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGTATTGTGAACAACACACTAAGACCTACCATCCCAAGTTATTGTGATCTAGAATGGAGAACACTAATGGAGCAGTGTTGGGCACCTAACCCGGCAATCAGGCCATCATTTACAGAAATAGCGCGCCGCTTGCGTGTGATGTCTGCTGCAGCAGCTAGTCAGACGAAAGGACAAGGACACAAAGCATCTAAATGA | 3588 | 0.4312 | MQKHPYNSMEPRKEEFHSAPQPVLQEHLDGMHANTRPSPSFNVSENKPVHNFSIQTGEEFALEFMRDRVNVNLKKPSFPNVVGDPNYSTGYMEFKGLLGHKGSESGSDVSMLASIEKGPKEFDRRNSALHQERSNYGSGRSIPRTSSTNQDNNRVLHGISSSGSSDSLSRMKILCSFGGRILPRPSDGKLRYVGGETRIISIRKDINWPELMQKISSIYNETRVIKYQLPGEDLDALVSVTSDEDLRNMMEECHDLQRRRGSLKLRMFLFSINDLDDTQFGLGSMDGGDSEVQYVVAINGMNVESRSNSILRFAGSSNDIQELDRQTIDKETKRAVVESYGVGSSSLSGNVNPVLTNQSSQPVLPTSSNAYEAYPFFYEDPIIQQGGTSQYPIHNGPFPSNSSARNLADAPVSLPTFGVANQGITSEGQAMASGELHVQSSLPSRPFEGGLQGNLSEAPVPVAVSEALHPAMPLENKISTAESEVLNPIQISRSGEDDFYPASTDAFSRALVDAESNIIDFSCLEPPPLPNRVYYSERIIPREHADLLNRSAKSDDAYGSHLLMADLLSDLNRMNSVSETSDMFHNENLSNLNTVSNSSAKPVRGDGHAISSKHLPDATSQVNPKLYQLADSDLKPVLSDNKISENETNTSKDSHKILPADETKSTENLAFRRVPSVEHNENLTSKLQDQNLSEAPTREPLDAKSKPSQGDILIDIEDRFPRDFLYDMFSKAVHSEDSANISPLPADRAGLSLKMDNHEPKSWSYFQKLAHEGFDNVSLIDQDNIGFSSAVSKVKEGDSKFNISAPPPADVIVLTGPKESHSNINFGQENQNSLPVITKSEAIVFQPENNHSELKANENKNINAAPVENIRPQESEYQDGNNEARDVAVAPQDISFDDFDISTLQIIMNADLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFSGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWRTLMEQCWAPNPAIRPSFTEIARRLRVMSAAAASQTKGQGHKASK | 1195 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi4g00927 | 1195 | MobiDBLite | consensus disorder prediction | 639 | 710 | - | - | |
| Vivi4g00927 | 1195 | Pfam | Protein tyrosine and serine/threonine kinase | 913 | 1175 | IPR001245 | GO:0004672|GO:0006468 | |
| Vivi4g00927 | 1195 | MobiDBLite | consensus disorder prediction | 120 | 167 | - | - | |
| Vivi4g00927 | 1195 | Coils | Coil | 246 | 266 | - | - | |
| Vivi4g00927 | 1195 | ProSitePatterns | Protein kinases ATP-binding region signature. | 918 | 943 | IPR017441 | GO:0005524 | |
| Vivi4g00927 | 1195 | SMART | serkin_6 | 912 | 1178 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Vivi4g00927 | 1195 | MobiDBLite | consensus disorder prediction | 678 | 695 | - | - | |
| Vivi4g00927 | 1195 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1037 | 1049 | IPR008271 | GO:0004672|GO:0006468 | |
| Vivi4g00927 | 1195 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 237 | 1176 | - | - | |
| Vivi4g00927 | 1195 | Gene3D | - | 189 | 271 | - | - |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi4g00927 | - | - | mtr:120578222 | 2014.96 |
Showing 1 to 1 of 1 entries