Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00926 ATGCAGAAACATCCATATAATTCCATGGAGCCTCGAAAGGAGGAATTCCATTCTGCACCGCAACCGGGTTTGCAGGACCATCTGGACGGCATGCATGCCAATACAAGGCCTTCTCCTTCCTTTAACGTGTCGGAAAATAAACCTGTACATAATTTCTCCATACAGACTGGCGAGGAGTTTGCTCTCGAGTTCATGAGGGACAGGGTGAATGTGAATCTCAAGAAGCCTTCGTTTCCGAATGTTGTCGGAGATCCTAATTACTCGACAGGGTATATGGAATTTAAAGGCCTTTTAGGCAATAAAGGATCTGAGAGTGGTTCCGATGTTTCTATGCTTGCAAGTATTGAAAAAGGTCCGAAAGAGTTTGACAGAAGGAGTTCTGCTTTACATCAAGAAAGAAGTAATTATGGCTCAGCACGAACAATTCCTAGAACATCGTCTACTAATCAAGATAACAACCGAGTCCTGCACGGTATTTCTTCTTCTGGATCTTCTGACAGCTTATCAAGGATGAAGATTCTATGCAGTTTTGGTGGTAGAATATTACCGCGGCCGAGTGATGGAAAGCTTAGATATGTCGGGGGTGAAACACGGATCATTAGAATTAGAAAGGACATAAATTGGCCGGAGCTTATGCAGAAAATATCATCAATCTATAATGAGACTCGAGTAATAAAGTATCAGCTCCCCGGAGAAGATCTCGATGCTCTAGTTTCAGTAACGTCTGACGAGGATCTACGGAATATGATGGAGGAATGTCATGATCTACAAAGAAGGAGAGGATCGTTAAAGCTTCGGATGTTCCTGTTCTCGTTAAATGATTTGGATGATACTCAGTTTGGTCTCGGTAGCATGGATGGTGGTGATTCCGAAGTCCAGTATGTAGTTGCTATTAATGGCATGAATGTGGAATCAAGAAGCAACTTTATACTCCGTTGTGCCGGAAGTTCATTTGAAAATAAACAAGCATAA 972 0.4228 MQKHPYNSMEPRKEEFHSAPQPGLQDHLDGMHANTRPSPSFNVSENKPVHNFSIQTGEEFALEFMRDRVNVNLKKPSFPNVVGDPNYSTGYMEFKGLLGNKGSESGSDVSMLASIEKGPKEFDRRSSALHQERSNYGSARTIPRTSSTNQDNNRVLHGISSSGSSDSLSRMKILCSFGGRILPRPSDGKLRYVGGETRIIRIRKDINWPELMQKISSIYNETRVIKYQLPGEDLDALVSVTSDEDLRNMMEECHDLQRRRGSLKLRMFLFSLNDLDDTQFGLGSMDGGDSEVQYVVAINGMNVESRSNFILRCAGSSFENKQA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00926 323 Gene3D - 189 271 - -
Vivi4g00926 323 MobiDBLite consensus disorder prediction 120 166 - -
Vivi4g00926 323 CDD PB1_UP2 174 270 - -
Vivi4g00926 323 MobiDBLite consensus disorder prediction 1 47 - -
Vivi4g00926 323 MobiDBLite consensus disorder prediction 1 20 - -
Vivi4g00926 323 SMART PB1_new 185 270 IPR000270 GO:0005515
Vivi4g00926 323 Pfam PB1 domain 187 270 IPR000270 GO:0005515
Vivi4g00926 323 Coils Coil 246 266 - -
Vivi4g00926 323 MobiDBLite consensus disorder prediction 131 166 - -
Vivi4g00926 323 PANTHER OS05G0427100 PROTEIN-RELATED 161 305 - -
Vivi4g00926 323 SUPERFAMILY CAD & PB1 domains 186 278 - -
Vivi4g00926 323 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 190 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00926 Vivi-Chr4 25332917 25335292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00926 7 323 MAP Kinase Kinase Kinase AT1G79570 53.395 3.68e-97 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00926 - - vvo:131596911 648.662