Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00917 ATGGCTTCGTCCCTTTTGACAAAGATTCTTTTATCTCCTCGCTCGATTCACACCTCCTCCTTATTCACTCACCACCCACCAATTCTCTCTTCTCTCTTCAATAAGCAGGTGTTCTCTATACGAGCTGTTTCAACCTTTACATCCCAAAATACTAAGTTGACTAGTTGGGCTCCTTGTATGGCTTCTTCAGTAGTTAGTAGAAGAGCTACATATTCGACGCGATCTGCACCTACGAATGAGCCGGTTGTTTCTGTAGATTGGCTTTACGAAAACTTGAAGGAGCCGGATATTAAGGTAGTGGATGCGTCCTGGTACATGCCGGATGAGCAAAGGAATCCGATTCAAGAGTATCAGGTTGCTCACATTCCCGGGGCCCTTTTCTTTGACATAGATGGAATCGCAGACCGCACTACAAATTTGCCGCACATGTTGCCTTCAGAGGAAGCTTTTGCCGCTGCTGTTTCTGCTCTTGGCATACATAACAAAGACGACCTAATTGTTTATGACGGAAAAGGACTATTTAGTGCAGCCCGTGTTTGGTGGATGTTCCGAGTGTTTGGACATGACAGAGTTTGGGTATTAGACGGTGGCCTACCAAGATGGCGTGCATCTGGTTACGATGTTGAATCTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGAGAAAGTATCTCAAGGACAAGCAGTTGGTCCAATCACATTTGAGACTAAATTTCAGCCACATCTTGTTTGGACCCTTGAACAGGTAACGAAAAATATAGAGGAAAAATCTCACCAACAGGTAGATGCTCGATCAAAGCCTAGGTTTGACGGAATTGCACCAGAGCCCAGAAAGGGAATCAGAAGTGGCCACGTACCTGGCAGCAAATGCATTCCTTTTCCCCAGATTTTAGATAGTTCACAAGCATTGTTACCAGCAGGCGAGCTTAAGAAGCGATTTGAACAAGAAGGCATCTCTTTGGAAAAGCCGGTCGTGACTTCGTGTGGAACAGGAGTAACTGCATGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGACCGATGTTCCGGTTTACGACGGATCATGGACCGAATGGGGATCACATCCTGATACTCCTGTTGACACCGCAGATATCGCCGCAAAAACGCAATAG 1155 0.458 MASSLLTKILLSPRSIHTSSLFTHHPPILSSLFNKQVFSIRAVSTFTSQNTKLTSWAPCMASSVVSRRATYSTRSAPTNEPVVSVDWLYENLKEPDIKVVDASWYMPDEQRNPIQEYQVAHIPGALFFDIDGIADRTTNLPHMLPSEEAFAAAVSALGIHNKDDLIVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVSQGQAVGPITFETKFQPHLVWTLEQVTKNIEEKSHQQVDARSKPRFDGIAPEPRKGIRSGHVPGSKCIPFPQILDSSQALLPAGELKKRFEQEGISLEKPVVTSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGSHPDTPVDTADIAAKTQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00917 384 FunFam Sulfurtransferase 75 217 - -
Vivi4g00917 384 Pfam Rhodanese-like domain 253 368 IPR001763 -
Vivi4g00917 384 Pfam Rhodanese-like domain 84 203 IPR001763 -
Vivi4g00917 384 MobiDBLite consensus disorder prediction 262 293 - -
Vivi4g00917 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 79 212 IPR036873 -
Vivi4g00917 384 PANTHER THIOSULFATE SULFERTANSFERASE 76 377 IPR045078 GO:0016783
Vivi4g00917 384 CDD TST_Repeat_1 82 205 - -
Vivi4g00917 384 SMART rhod_4 83 207 IPR001763 -
Vivi4g00917 384 SMART rhod_4 251 372 IPR001763 -
Vivi4g00917 384 FunFam Sulfurtransferase 246 377 - -
Vivi4g00917 384 MobiDBLite consensus disorder prediction 262 284 - -
Vivi4g00917 384 ProSiteProfiles Rhodanese domain profile. 93 210 IPR001763 -
Vivi4g00917 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 254 376 IPR036873 -
Vivi4g00917 384 ProSitePatterns Rhodanese C-terminal signature. 356 366 IPR001307 GO:0004792
Vivi4g00917 384 Gene3D - 75 217 IPR036873 -
Vivi4g00917 384 CDD TST_Repeat_2 252 368 - -
Vivi4g00917 384 ProSiteProfiles Rhodanese domain profile. 261 375 IPR001763 -
Vivi4g00917 384 Gene3D - 246 372 IPR036873 -
Vivi4g00917 384 ProSitePatterns Rhodanese signature 1. 117 128 IPR001307 GO:0004792
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00917 Vivi-Chr4 25142873 25147578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00917 60 378 Sulfurtransferasese or Rhodanese AT1G79230 77.116 0.0 541