Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00910 ATGTGCTCTGCCACTGCTGCAACACCCTTGTTTTCCACCGATCACCACCTTCCCAAATCCTTCACTCGTCTCTGCAAACCCTTCCATTCTAGGGTTCCCACTTCCTTAACCTTCCATTCATCACCACCTACCTTCTTTGTCAGAGCTACCGTTGTGAAGTGGCGAAGTCCAAAGCAAACTCTACCTCCCAACAGCGACACCGGTTTCCAAAAAAAGGCCCTATATCTAGAATCTATCGGTATCGACCCTTTCTCACTTATTGAAAGTCATCCGATGCTGATCACTGCCTCACTCAACGATATAAAATCCACCGTGGAATACATCACCGCAATGAATTTCTCTGCAATCGAGTTTAGTCGAATGGTTGGCATGTGCCCTGCGATCCTCACCACGAAAGTCTCCGACATTATACCCGTCTTCACGTTCCTCCACCGCGAAGTTCGTGTAAGTAGCTCAAAAATCAAGCACGTAATAAATCGCCGTCCTCGGTTAATCATCTGCAACGTCGACAAACAGCTCCGTCCAACCATGTACTTCCTCCAAAGCATCGGCATAGAAGAGGTAAACAGGCACACCGACTTGCTCTCATGCAGCGTCGAAGACAAGTTCATGCCACGAATCGAATACTTCGAGAACATCGGATTCTCTCGCCGCGACGTGACTTCTATGTTCCGACGATTTCCTCAACTGTTTTGTTGTAGTATTAAGAACAGTTACGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGGTGAAAGAGTTTCCACAATTTTTCTCATATAGCTTAGAGAATAGGATTAAGCCTAGACATAAAAGGTGTGTAGAAATGGGAGTGTGTTTTCCTCTTCCTTTGTTGTTAAAGAGTAGTGAAGTGAAATTTCAGAATAGATTAGAAGCTTTTGTAAATTCTTCAACACCATTGGAAACTTCTCCTCTGTGGTGTGCTGGTCTTGGTAATTATTGA 981 0.4465 MCSATAATPLFSTDHHLPKSFTRLCKPFHSRVPTSLTFHSSPPTFFVRATVVKWRSPKQTLPPNSDTGFQKKALYLESIGIDPFSLIESHPMLITASLNDIKSTVEYITAMNFSAIEFSRMVGMCPAILTTKVSDIIPVFTFLHREVRVSSSKIKHVINRRPRLIICNVDKQLRPTMYFLQSIGIEEVNRHTDLLSCSVEDKFMPRIEYFENIGFSRRDVTSMFRRFPQLFCCSIKNSYEPKYNYFVVEMGRDLKEVKEFPQFFSYSLENRIKPRHKRCVEMGVCFPLPLLLKSSEVKFQNRLEAFVNSSTPLETSPLWCAGLGNY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00910 326 FunFam Transcription termination factor MTEF1, chloroplastic 143 307 - -
Vivi4g00910 326 PANTHER CGI-12 PROTEIN-RELATED 85 308 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 Gene3D Transcription termination factor 3, mitochondrial 132 308 IPR038538 -
Vivi4g00910 326 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 SMART mt_12 187 216 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 SMART mt_12 221 253 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 Pfam mTERF 67 153 IPR003690 GO:0003690|GO:0006355
Vivi4g00910 326 Pfam mTERF 191 300 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00910 Vivi-Chr4 25013986 25016542 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g00910 mTERF 6.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00910 K15031 - gmx:100804440 519.62