Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00835 ATGCCCTTATCTCAATCTCCCATGGCTTCTTCAATCCCTCACCACTTCTATCCAAACTACACTCCTGATTTCACAGCAAACCAAGGCTTGATGTCTTCATCTATCATGGACAATAATACTATGATGTGGGGTTGTCAAGAAAATATCATGCCGGTTTTCGATAATTATGGGACATATGATCAGATTGTTTCACTTGATTGTGATGCTATGTCTTCTGGTACTTGGGTTCCGAATTTTGCTGAGCAACAAGATTTTGCGGTTCCGGCGTTGTTATCGGATTGTAAAGTCGGATTCTATGGTGGAGGGTTTCAGAATTTTAATGGAAGATATAGTAATAATAATAATCAGCCTCATGTTGGTCATGAGTTTGTAGATGATCAATGTTGCGGTTTTGTTGATGATATTAAACCACCTCCAGCAATTTTTCCAAATGTTTCAAGAGAAAATTGGGGGATTCAAGGTAATCAAATAGCAGCAGTTGAAGAACCAAACATAAAAGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTTCGATATTTGAAGAAAAGAAATCAAAGAAACTTCAACAAAACCATCAAGTATGCATGTCGGAAAACTTTAGCTGATAGAAGAGTGAGAGTGAGAGGAAGGTTTGCAAGAAACAATGAAATATGTGAAGAAGAACACATGGCCACAAAAAAGCTTGAGAATCATCATGATCATATTAATGAAGACTTTTATGGTTCTGATTCATTTCAGTTCCAGTTAAAGAATGAAGAGGAGGATTGGCTTCAAGAAGCCATGGCAAGTTTGGTGTATTTATCTCATTCATCACCAGAAGATATGTGA 837 0.3704 MPLSQSPMASSIPHHFYPNYTPDFTANQGLMSSSIMDNNTMMWGCQENIMPVFDNYGTYDQIVSLDCDAMSSGTWVPNFAEQQDFAVPALLSDCKVGFYGGGFQNFNGRYSNNNNQPHVGHEFVDDQCCGFVDDIKPPPAIFPNVSRENWGIQGNQIAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEICEEEHMATKKLENHHDHINEDFYGSDSFQFQLKNEEEDWLQEAMASLVYLSHSSPEDM 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00835 278 Pfam CCT motif 175 217 IPR010402 GO:0005515
Vivi4g00835 278 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
Vivi4g00835 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 105 228 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00835 Vivi-Chr4 19603225 19605645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00835 171 227 C2C2-CO-like Transcription Factor Family AT5G15850 45.614 7.85e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi4g00835 CCT 8.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00835 - - cam:101492034 419.083