Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00794 ATGATTCATTCCACTACGAAATCAGCCAAAGAGAAAGAAAACGATCGCGGCATCAGTTCGCACATCCTCACCCTCCATCGCCGTCTTCTCCACGCCTTAAACCTCGGAACCAGATACTTTGATGACAAGACAAATAGATGGAAGTGGCAGTGCGTTAACATTGAAGTGCAGAAAAATGTACTCCGATCAATTTCTGCGTTTCTTGATTCTATTGCAGGTGATGCACGTGCCATACGTCATTCCATTGTTAAGGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAGTGAGCCCTTGTTAAGCATGGCATCAAATGTGGCTGTGAAGTTAGTTAGTGTTTTACCGAGCCAACAGTTGCAATTGCGATTGTTGGATCTTGTCTATTGTCTATCATCCTTGCTATCTTCACATCAAGTAGAAGTTGCAATACCTTCTGCTACTGCTTTGAATTTGATAATCTCAAATCTGAGTGCTACGAGTGAGAAGGCTGTTATTGAAGCACTGAAAGAAACAGAGATTTCCGTTTGTATTGTTCAAAATATAAAAGACTGTGGTGGGAAGAAAATTGAATATTTTCTGGAGATGGCTTCACTTTTGAGTACAGTACTGTTGAGGTGGTCTTCATCTAGGTTCCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCATATAAAGACAGATAGTTCCATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGTGCAAAAACTCATCGAGGGTGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCAAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTTGTGTGGTGAAGCCCTTGTTGATGCCATAATTTGTGGGATGAGAGAGACAGGTCCGTCTTCCAAAAAAATTGAGAACAACTATGGTTCTGTATTAGTGGAAGCATGTAAGCTGGCTCTAATTACTCGTTGGGCTGGCGACCATCATATCAGGTTTTGGAAACAAGGAATTGATAAAGTCCTCCTTAGTCTTCTGATTGAAAATATTCATGATCAATCAACTGAACTTGTCTTGTCATTGGAAAAACAAATATCCATGGTGAAAGAGGGACTGAAAGTTAATTATCACGTTGCTGTGAGGAGTTACGTGTGGAACATTCTTGGGTGGCTTGTAATTCATTGTTCAGAAAATTCAAACCCTTACAGTTATACGCATGAGAGTGAACTCCACATCAACTTACTGATTATGTGTGCATGCTTCACTTTTGTGGATGCAATTCAAAAATGGTGCCGGATATGTCAAAATGACGTTGATGATAATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAATTATATTTCTTCACATGCTAGATTTGTATTATCTGATATACTAAAGGTCAAAGGCGATCCATGCTTGAAAAATTCACTACATACCATAGATTATTTATCATCTTTGAAAAGCTATAGTTCATTTGATAAACTTCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTTACAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAGAGGGATAAAGGCTGTTGTTCTTCTTGTCCAACGATGCTTAAGTAATGATGTTCATATGGAAAGGTCTGAAGTTGCTCCTCATTTGCATACTGTATTCCATAAAAGGTCTTGTTGCTGGACTGGTAAAGGAGGCTGGGAAGGTTCCAATATCCTTTTATTTTATGGTCTGTGGGGCATAGCTGAATTTCTTCATCAGTGTTGCCTTTTACCAGACAATCCTCAGCAATTTACTAGAGAGGTGACAAACATTAACACTGAATTAGTTAACAAACTTCATGATATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTTCCAAAAGGATCGGGAAATCTCTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGGATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTTCTACCTTCTCAAGTGTTATCTAGTAGTAAGAGTTCTAAAGAAATAACAGATTGTTTTGTTAGAGAGACCGTGAGAGAAGTTCGCTATTCTTCTCATGTTGATTATGAAGCGTTGTTGTTATTATTGGAATATGTGTATTTGGGACACTTGCATGCAGCAGAAGAAGAAACTGTAAAGAAGCTCAAAGTTCTTGCTAAGCGTTGCAATCTACAACCTCTCTTGCAACTGCTTTGTAGACAATCTCCAAAGTGGGACGCACCTTTCCCCAGCTTTAATCTTACTTCATCTCCTGATTCAGCTGGAAGTTATTTTTTTGATGTCATAATGGAACCTAAATCGAATGAGTTTGTTGGATGTACATGTAATTTATGTCCTCACCCAGTACCGCATTTGCATGCTCACAAAGTTATATTGCAGTCTGGCTGTGACTATTTACAGGGTTTGTTCAGATCAGGAATGCAAGAGAGTCATTCACAAGTCATAAAGGTTGATATTAGCTGGGAAGCATTGGTTAAACTAGTACATTGGTTTTACTCTGATGAGCTGCCGAATCCTCCTTCTGGTTGTTTGTGGGTTAACATGGATGATCAAGAAAAGCTATTCCATTTGCAGCAATATGTGGAGCTTTGTTGGCTTGGTGAGTTCTGGATTTTGGAAAGTATTCAGGAAGCCTGCTGGAATGCGATTATGTCTTGTCTTGGCTCTTCTAAGCAGTTGTCCATTAAAATAATTAAAATGGCTTATAACCTCTCTTTGTGGAAGTTGGTTGACATTGCTGCAAATCTCATGGCTCCTTCGTATAGGCAATTACGGGATTCTGGTGAACTTGAAGAATTTGATGAAGCACTAGTTCACTTCATTTATTCTGCTTCTATTGAACTTAACCATGAAGGTGAAAAACGCTTTAGGTGA 3072 0.3818 MIHSTTKSAKEKENDRGISSHILTLHRRLLHALNLGTRYFDDKTNRWKWQCVNIEVQKNVLRSISAFLDSIAGDARAIRHSIVKESAADILGALLWILQCKSEPLLSMASNVAVKLVSVLPSQQLQLRLLDLVYCLSSLLSSHQVEVAIPSATALNLIISNLSATSEKAVIEALKETEISVCIVQNIKDCGGKKIEYFLEMASLLSTVLLRWSSSRFPVCNDVELMKVLANMHIKTDSSIKLVLLKLYTSLALCDSVVQKLIEGGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDLCGEALVDAIICGMRETGPSSKKIENNYGSVLVEACKLALITRWAGDHHIRFWKQGIDKVLLSLLIENIHDQSTELVLSLEKQISMVKEGLKVNYHVAVRSYVWNILGWLVIHCSENSNPYSYTHESELHINLLIMCACFTFVDAIQKWCRICQNDVDDNFQSEPVSRAVLMMIYSPCNYISSHARFVLSDILKVKGDPCLKNSLHTIDYLSSLKSYSSFDKLQLVINLIGLTCLTSLPQYQRCIIESRGIKAVVLLVQRCLSNDVHMERSEVAPHLHTVFHKRSCCWTGKGGWEGSNILLFYGLWGIAEFLHQCCLLPDNPQQFTREVTNINTELVNKLHDICSSTSFSPGVKWYVSYILSYFGFYGFPNEFSKRIGKSLNKEEYADLRLIVANGDSVSVHGVILAVRCPSLLPSQVLSSSKSSKEITDCFVRETVREVRYSSHVDYEALLLLLEYVYLGHLHAAEEETVKKLKVLAKRCNLQPLLQLLCRQSPKWDAPFPSFNLTSSPDSAGSYFFDVIMEPKSNEFVGCTCNLCPHPVPHLHAHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALVKLVHWFYSDELPNPPSGCLWVNMDDQEKLFHLQQYVELCWLGEFWILESIQEACWNAIMSCLGSSKQLSIKIIKMAYNLSLWKLVDIAANLMAPSYRQLRDSGELEEFDEALVHFIYSASIELNHEGEKRFR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00794 1023 ProSiteProfiles BTB domain profile. 851 906 IPR000210 GO:0005515
Vivi4g00794 1023 PANTHER OS06G0674800 PROTEIN 3 1017 IPR044953 -
Vivi4g00794 1023 SUPERFAMILY POZ domain 673 798 IPR011333 -
Vivi4g00794 1023 Gene3D Potassium Channel Kv1.1; Chain A 676 801 IPR011333 -
Vivi4g00794 1023 Gene3D Potassium Channel Kv1.1; Chain A 826 993 IPR011333 -
Vivi4g00794 1023 Pfam BTB/POZ domain 686 796 IPR000210 GO:0005515
Vivi4g00794 1023 Pfam BTB/POZ domain 850 912 IPR000210 GO:0005515
Vivi4g00794 1023 SMART BTB_4 837 953 IPR000210 GO:0005515
Vivi4g00794 1023 SMART BTB_4 694 805 IPR000210 GO:0005515
Vivi4g00794 1023 SUPERFAMILY ARM repeat 55 678 IPR016024 -
Vivi4g00794 1023 CDD BTB_POZ_ZBTB_KLHL-like 850 923 - -
Vivi4g00794 1023 ProSiteProfiles BTB domain profile. 694 774 IPR000210 GO:0005515
Vivi4g00794 1023 SUPERFAMILY POZ domain 850 950 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00794 Vivi-Chr4 17927413 17933578 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi4g00794 BTB 3.4e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00794 - - mtr:25487018 1806.19