Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00766 ATGGTTATATTAGTGGGAAACGTGCAAGGGACAATAAGTTCTCTTGCTTCACCAATGAGTTTAGGGAGTTTCATTGGTGCAAGTAGTTCACATTCTGTTGTTAGAAGAGTTTCTCTTTCTAGAGGGAATTGTGTTAGAGGGAAAAAAAGATGGCATTGTGTTTCTTTGTCTGTTTGTAGATATTCAGTTACCACTACTGATTTTGTTGCTGACCAAGGGAATCCGGTTTCCTTTGATTCTTCTAACAATGGTGATAGTGATAAAGGTGGTGGTGGTGGTGGTGCTAGTGCTAGTGCTAGTTTTGGACTTAAACCTCCTCCTAGGCCTGTGTTGAAGTCTACGGATAATGACGGTGTTTCAGGATCGGGTTCGGGTTTAGGGGGTTCGTTGAGGAATGGTCAGGGTTCGGATAATGTGGATGAGAGGAATAAGGTGATTGAATCGCTTGGAGATGTTTTGGAGAAGGCTGAAAAGCTTGAAAATTCTAAGCTGGATGGGGGAAGAAGTAATGGTTCGGTAAATAAACCACCGGCTAGACCTGAGATAAATGATAAACCTAAGGATGTTAGACCTGTGAGCTCGTTACAGAAACATAAGTCTAAGACGTTGAAGAGTATATGGCGTAAAGGGGATTCGGTTGCGAGTGTGCAGAAGGTTGTGAAGGAAGTTTATAGGCCTAGTGTTAAGAGTAGTGAAGTGGGGGAATCAGTAATTGGGGGAGGGGAGAAGGTGGCATCTGAGTCTCGTGATCTTCAGCCTCCTTTAAGGCCTCAACCGACGTTACAATCTAGGCCTTCTATTGCCCCGCCTCCACCGCCGCCTGTTAAAAAAGCTGTTATCTTGAAGGACGATAAAGGGCAAGGTGAAACACCTGTTAAGCCTAAAGAAAAAAAGGCGCCTATCTTGATTGATAAGTTTGCTTCAAAGAAACCGGCAGCTGACCCTGCGATGGCTCGAGCAGTTGTAGCAGCCCCTACGAGACCAGGGAGGGCCCCTCCCCAAGGAAGGTTTAAAGATGATATCCGGAGGAAAGGTGCTTCGTTTGGGGCAGGACCAAGAAGACGGGTATTCAATAAGGATGGTGTTCCTGATAAGGACACTCGTGGTGCTACAAGAAAAGGAAGGAAATGGAGTAAAGCGAGTCGTAGGGCTCTACGGCTTCAGGCTGCCAGGGATGCTGCTCCGGTTAAAGTTGAAATTCTAGAGGTCAGCGACCAAGGTATGCTGGTGGAAGAGTTGGCTTTCAATTTGGCGATCACTGAAGGTGAAATCCTCGGTTCTCTATACTCCAAGGGGGTTAAACCAGATGGGGTACAAACTCTAGACAAAGATATGGTGAAGATGATATGTAAAGATTATGAAGTGGAAGTTATCGATGCCGATCCTTTCACAGTTGAAGGATTAGTGAATAGAAGGGAAATTCTCGAGGAAGATGACCTCGACAAACTCAAAGATAGGCCTCCTGTTATTACTATCATGGGCCATGTTGATCACGGCAAGACAACTCTTTTGGATTATATAAGGAAGACCAAGGTAGCGGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGAGCATATAAAGTGCAAGTACCTTTTGATGGCAAAACGTTGCCGTGTGTTTTTCTCGACACTCCTGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGCGTAACAGACATTGCTATTATCGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAAAGAAGCTATAGCTCACGCCAAAGCAGCAGGAGTACCCTTAATCATTGCTATTAACAAGATAGATAAAGACGGAGCGAATCCAGATCGAGTTATGCAAGAGCTATCTTCCATTGGTTTGATGTCAGAAGACTGGGGTGGCGACATCCCGATGGTTCAGATAAGTGCTCTTCAAGGGGAGAACGTAGACGATCTTTTGGAAACAATTATGCTTGTTGCCGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCAGGCCTAGATAAATCAAAAGGACCGTTTGCGACATTTATTATCCAGAATGGAACACTCAGAAGAGGTGATGTAGTAGTCTGCGGAGGAGCTTTTGGAAAGGTAAGAGCTTTATTCGATGATGGTGGAAAGCGTGTCGATGAAGCTACACCTTCTATACCTATCCAGGTTATCGGATTGAATAATGTTCCAGTTGCTGGTGATGTGTTTGAGGTTGTTGAATCCCTTGATATTGCGCGTGAAAAGGCAGAGTCTCGTGTTATGTCATTGCGAGATGAACGTATTTCAGCAAAGATGGGAGATGGCAAGGTCACTCTTTCTTCTTTAGCTTCTGCAGTTTCGTCAGGAAAGCTTTCTGGTCTAGACTTGCACCAATTGAATATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCCGTCAAACAAGCGCTGCAGGTGCTACCGCAAGATAATGTCACGCTGAAGTTTTTGATGGAAACCACCGGTGATGTAAGCACAAGTGATGTTGACCTTGCCGCAGCAAGCAAAGCTATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCAGTAAAAAGCTATGCAGATAATAAAGGTGTTGAGATACGATTATATAAAGTTATTTATGAATTAATTGACGATGTACGAAAAGCAATGGAAGGACTCCTCGATTCTGTTGAGGATCAAGTATCAATTGGCTCGGCAGAATTACGGGCCGTATTCAGAAGTGGTAGTGCTCGCGTTGCTGGATGCATGGTTACAGAAGGAAAGGTTACAAAAGGCTGTGGCATTCGAGTCATTCGGAAGGGAAAAGTAGTTCATGTTGGTATTCTCGATTCTTTGAGACGGGTGAAAGAGATTGTTAAAGAGGTAAACGCCGGTCTCGAGTGCGGGCTTGCGTTAGAAGACTACGATGAGTGGGAAGAGGGTGATATTCTTGAAGCCTTCAACACAGTCGAGAAGAGAAGAACCCTCGAAGAAGCCTCAGCATCAATGGCAGCCGCAGTGGAAGGAGTAGAAGATAAACAACAGAACGAACAACGAAGCGAGTAA 3066 0.4491 MVILVGNVQGTISSLASPMSLGSFIGASSSHSVVRRVSLSRGNCVRGKKRWHCVSLSVCRYSVTTTDFVADQGNPVSFDSSNNGDSDKGGGGGGASASASFGLKPPPRPVLKSTDNDGVSGSGSGLGGSLRNGQGSDNVDERNKVIESLGDVLEKAEKLENSKLDGGRSNGSVNKPPARPEINDKPKDVRPVSSLQKHKSKTLKSIWRKGDSVASVQKVVKEVYRPSVKSSEVGESVIGGGEKVASESRDLQPPLRPQPTLQSRPSIAPPPPPPVKKAVILKDDKGQGETPVKPKEKKAPILIDKFASKKPAADPAMARAVVAAPTRPGRAPPQGRFKDDIRRKGASFGAGPRRRVFNKDGVPDKDTRGATRKGRKWSKASRRALRLQAARDAAPVKVEILEVSDQGMLVEELAFNLAITEGEILGSLYSKGVKPDGVQTLDKDMVKMICKDYEVEVIDADPFTVEGLVNRREILEEDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKTKVAASEAGGITQGIGAYKVQVPFDGKTLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTKEAIAHAKAAGVPLIIAINKIDKDGANPDRVMQELSSIGLMSEDWGGDIPMVQISALQGENVDDLLETIMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIIQNGTLRRGDVVVCGGAFGKVRALFDDGGKRVDEATPSIPIQVIGLNNVPVAGDVFEVVESLDIAREKAESRVMSLRDERISAKMGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDVSTSDVDLAAASKAIIFGFNVKAPGSVKSYADNKGVEIRLYKVIYELIDDVRKAMEGLLDSVEDQVSIGSAELRAVFRSGSARVAGCMVTEGKVTKGCGIRVIRKGKVVHVGILDSLRRVKEIVKEVNAGLECGLALEDYDEWEEGDILEAFNTVEKRRTLEEASASMAAAVEGVEDKQQNEQRSE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00766 1021 Gene3D Translation factors 661 776 - -
Vivi4g00766 1021 Gene3D Translation factors 899 995 - -
Vivi4g00766 1021 Hamap Translation initiation factor IF-2 [infB]. 7 994 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Vivi4g00766 1021 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 485 658 IPR000795 GO:0003924|GO:0005525
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 278 302 - -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 72 141 - -
Vivi4g00766 1021 FunFam Translation initiation factor IF-2 482 660 - -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 72 87 - -
Vivi4g00766 1021 SUPERFAMILY Translation proteins 661 745 IPR009000 -
Vivi4g00766 1021 CDD IF2_eIF5B 488 654 - -
Vivi4g00766 1021 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 792 904 IPR036925 -
Vivi4g00766 1021 Gene3D - 793 897 IPR036925 -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 357 373 - -
Vivi4g00766 1021 Gene3D - 482 660 IPR027417 -
Vivi4g00766 1021 FunFam Translation initiation factor IF-2 661 779 - -
Vivi4g00766 1021 CDD IF2_mtIF2_II 665 757 IPR044145 -
Vivi4g00766 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 661 IPR027417 -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 326 379 - -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 159 203 - -
Vivi4g00766 1021 Pfam Translation-initiation factor 2 793 886 IPR023115 -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 180 195 - -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 258 277 - -
Vivi4g00766 1021 Pfam Elongation factor Tu GTP binding domain 490 650 IPR000795 GO:0003924|GO:0005525
Vivi4g00766 1021 NCBIfam translation initiation factor IF-2 406 996 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Vivi4g00766 1021 PRINTS GTP-binding elongation factor signature 541 551 IPR000795 GO:0003924|GO:0005525
Vivi4g00766 1021 PRINTS GTP-binding elongation factor signature 557 568 IPR000795 GO:0003924|GO:0005525
Vivi4g00766 1021 PRINTS GTP-binding elongation factor signature 489 502 IPR000795 GO:0003924|GO:0005525
Vivi4g00766 1021 PRINTS GTP-binding elongation factor signature 593 602 IPR000795 GO:0003924|GO:0005525
Vivi4g00766 1021 Coils Coil 744 764 - -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 229 302 - -
Vivi4g00766 1021 FunFam Translation initiation factor IF-2 793 897 - -
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 333 347 - -
Vivi4g00766 1021 SUPERFAMILY Translation proteins 901 994 IPR009000 -
Vivi4g00766 1021 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 204 1002 IPR015760 -
Vivi4g00766 1021 NCBIfam small GTP-binding protein domain 487 648 IPR005225 GO:0005525
Vivi4g00766 1021 MobiDBLite consensus disorder prediction 115 136 - -
Vivi4g00766 1021 FunFam Translation initiation factor IF-2 898 995 - -
Vivi4g00766 1021 CDD mtIF2_IVc 904 986 - -
Vivi4g00766 1021 ProSitePatterns Initiation factor 2 signature. 947 969 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00766 Vivi-Chr4 17387381 17392816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00766 486 884 Eukaryotic Initiation Factors Gene Family AT1G76810 28.788 1.45e-29 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00766 K02519 - gmx:100778924 1391.71