Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00763 ATGGAAGAACCAACATTTTTGTTTCCACCACCAGACTCCGACCTCGACCTCAGTTTCACCAGCACCACCACCGACCGCACCTTCACCTCCTCCAGCGCTCGCACCAGCTTAGCCCGCACAAGCAGCCTCGCTCTCAGCTTCAACGACCGTCTCTCCACCGCCTCAGCCGCTGCTGGAGCCACCCTTTCCTCCTCAATCACACGCCGCCCCCACCGTAGCTCTGATCCCAACTGGACCGCAATCAAGGCCGCAACAAATCTCTCCTCCGACGGCCGTCTCCACCTCCGTCATATCAAACTCCTCCGCCACCTCGGCTCCGGAGACCTCGGCCGTGTTTACCTCTGCCGTCTCCGCGACTACGACGGTGCAAATTTCGCTCTTAAAGTTGTTGATAAAGACCTTCTCACTCTCAAGAAATCAACTCACGCAGAAACAGAAGCAGAAATCCTTCATATGCTCGATCATCCTTTTCTCCCGACTCTCTACGCGCGTATCGACGTATCTCACTACTCCTGCCTCCTGATTGATTACTGCCCCGGCGGAGACCTCCACTCTCTCCTCCGTAAACAACCGGGAAACCGCTTTACACTCTCCGCAGCGCGTTTCTTCGCTGCGGAGATCCTCGTCGCGCTCGAGTATCTCCACGCCCTCGGCGTGGTTTACCGCGACTTAAAACCCGAGAATGTCCTTCTACGTGAAGACGGACACGTCATGCTTTCAGATTTCGATCTCTGCTTCAAAGCTGATGTTGCACCCACATTTGAATTTGCAGCCAATCATAAACCTCACATGGACCCCACTTACAGTTGTTTCAGTTACAACATATCACAATCAAAATCAAGAGTAACCGCTGAGTTTGTCGCGGAACCAACCGCGGCATTCTCACGGTCGTGCGTTGGAACGCACGAGTATTTAGCGCCGGAGCTTGTTTCTGGCTACGGCCACGGCAATGGCGTAGATTGGTGGGCGTTTGGTGTTTTTATCTACGAGCTTTTATACGGTACGACACCGTTTAAGGGGTGTAACAAAGAGAGCACGCTGCGCAATATAGCGTCTAACGCCGATGTTAAGTTCAATGTGGCGGAGAATGAGGAAGTCGGAATGATTGAAGCGAGAGACTTGATAGCGAAGTTGTTAGTGAAGGATCCGAGGAGGAGGCTCGGGTGCGCCAGGGGCGCAACGGATATTAAACGCCACCCGTTTTTCGATGGGATTAAGTGGCCTTTGATAAGGAATTATAAGGCACCTGAAGTTAAGGGGTTGTTGAGGAGGAAAAAATCGGATTCGAGTTTGAGTTGTGGGAGTAGTAAGAGGAAGAGAGGGTGGTGGAAGAGACTTGGAGGTGTGTTGAGAAATAAAGGAGGTAGATTTGAGTTACTTTCGAATTGTAGTAATAATAATAGTTATTATTGTTATGTTAATAATAGTAATAAGGTTAGGTAA 1443 0.5066 MEEPTFLFPPPDSDLDLSFTSTTTDRTFTSSSARTSLARTSSLALSFNDRLSTASAAAGATLSSSITRRPHRSSDPNWTAIKAATNLSSDGRLHLRHIKLLRHLGSGDLGRVYLCRLRDYDGANFALKVVDKDLLTLKKSTHAETEAEILHMLDHPFLPTLYARIDVSHYSCLLIDYCPGGDLHSLLRKQPGNRFTLSAARFFAAEILVALEYLHALGVVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPTFEFAANHKPHMDPTYSCFSYNISQSKSRVTAEFVAEPTAAFSRSCVGTHEYLAPELVSGYGHGNGVDWWAFGVFIYELLYGTTPFKGCNKESTLRNIASNADVKFNVAENEEVGMIEARDLIAKLLVKDPRRRLGCARGATDIKRHPFFDGIKWPLIRNYKAPEVKGLLRRKKSDSSLSCGSSKRKRGWWKRLGGVLRNKGGRFELLSNCSNNNSYYCYVNNSNKVR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00763 480 Gene3D Transferase(Phosphotransferase) domain 1 182 248 - -
Vivi4g00763 480 PANTHER FLIPPASE KINASE 1-RELATED 35 420 - -
Vivi4g00763 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Vivi4g00763 480 CDD STKc_phototropin_like 96 418 - -
Vivi4g00763 480 ProSiteProfiles Protein kinase domain profile. 98 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00763 480 FunFam Serine/threonine-protein kinase OXI1 182 250 - -
Vivi4g00763 480 FunFam Serine/threonine-protein kinase OXI1 293 420 - -
Vivi4g00763 480 SUPERFAMILY Protein kinase-like (PK-like) 75 416 IPR011009 -
Vivi4g00763 480 Gene3D Phosphorylase Kinase; domain 1 99 181 - -
Vivi4g00763 480 Pfam Protein kinase domain 100 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00763 480 Gene3D Transferase(Phosphotransferase) domain 1 296 415 - -
Vivi4g00763 480 SMART serkin_6 98 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00763 Vivi-Chr4 17340671 17342283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00763 12 473 AGC Kinase Gene Family AT1G53700 65.532 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi4g00763 Pkinase 2.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00763 - - lja:Lj0g3v0200189.1 669.463