Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00761 ATGGCATTTGATTCAAGTTTCCATTCAAAAAATGTGTTTTTTAACTTTTACTATACGATGATTCTATTGTTTAGCCTTGGAATGTTCCTGGTAGGTTCAATCAATGAAGAGGTTTCAATTCTTTTGAAGTTCAAAGCTTCTCTTATAGACTCAAATGATAATCTTGTTGACTGGAATCCTTCTGATGCATCTCCATGCAATTGGACTGGTGTGTATTGTAGTGGTTCAGTGGTAACTTCTGTTACACTCCACAACCTTACTCTCTCTGGTAATTTGTCTCCATCAATCTGTAACCTTCCGTGGTTAACCGAGTTGAATGTGTCGAAAAACTTTATCTCGGGTCAAATTCATGAAGCTTTTTTTGTTACCTGTGATAAACTCGAGGTTTTAGACCTTTGTACTAATAGGTTTCATGGAGCATTTTTAAGCCTTGTTTGGAAAATCAGAACTCTTAGAAAGCTTTACCTTTGTGAAAACTATATGTATGGCGAAATTCCGGAAGATATTGGTGAGTTAACATCATTAGAAGAGTTGGTGATTTATAGCAATAACTTAACCGGAACCATTCCTTCGTCGATAAGTAAGTTGAAGAAGCTTAGAGTTATAAGAGCAGGTTTGAATGGCTTGTCAGGAAAGTTACCTTCAGAAATCAGTGAATGTGAAAGCTTAGAGACATTAGGGTTAGCACAGAATCAGTTGACAGGCTCTATTCCAAAGGAGCTTCAAAAGCTTCAGAGTCTTACGAATTTGATTCTATGGCAAAACTCGTTTTCGGGTGAGCTTCCTCTTGAGATAGGTAACATTAGCAGCCTTGAGTTGATTGCTTTGCATCAGAATTTGTTGGTTGGTGGTATCCCGAGAGAGATCGGGAGGCTATCGCGGTTGAAGAGATTGTACATGTACACGAATCAGTTGAATGGTACGATTTCGGCCGAGTTAGGAAACTGTACTAATGCTATTGAGATTGACCTGTCTGAAAACCATTTGATTGGTATCATTCCAAAAGAGTTAGGCCAAATCTCTAATCTTACCTTGCTTCATTTGTTCGAAAACAATTTGCAAGGCGATATTCCGAAGGAGCTTGGAAATTTGAGGCTGCTGAAAAATTTAGATTTGTCTTTGAACCACTTGACAGGTAGAATTCCATTGGAGTTTCAAAATTTGGAACTCATGCAAGATTTGCAGCTATTTGATAATCAACTTGAAGGTGTGATTCCACCTCATCTCGGAGCTGTTAAGAACCTTACTATTCTTGATATATCTTCGAATAATCTTGTCGGTATGATTCCGATTCATCTTTGTGAATATCAGAAACTTCAGTTCCTTAGCCTTGGATCAAATAGGCTCTTTGGTAATATTCCTTATAGCTTGAAAGTTTGTAAGTCTCTTGTGCAGTTAATGCTAGGGGATAATCTCTTGACGGGAAGCTTACCTGTTGAATTGTATGGACTTCATAATCTAACCGCGCTCGAGCTTCATCAGAACCGATTCTCGGGACTAATTAGCCCTGGGATTGGTCAGCTTAGGAGTTTAGAGAGGCTGCATTTGTCGGATAACTATTTTTCTGGTTTTCTACCTTCTGAGATTGGAAATTTGTCTCAACTTGTCACATTCAATGTTTCGTCGAATCGGTTTGGTGGAAGTATTCCGGACGAGTTAGGAAACTGTGTGAGGCTGCAGAGGCTTGATCTCAGCAGGAACAAGTTTACTGGTATGCTTCCAGGTTCAATTGGAAATCTTGTGAATTTGGAGCTACTAAAAATTTCTGATAATATGCTCTTTGGAGAGATACCGGGCGCGTTGGGAGACCTTATTCGGCTAACCGATTTGGAGCTCGGAGGTAATCGATTCTCAGGAACGATCCCTTTTCATTTTGGAAGACTTTCTGCTCTTCAGATAGCACTTAACTTGAGTCACAACAATCTTTCTGATACAATTCCTGATAGCTTAGGTAGCTTGCAAATGCTAGAATCGCTTTACTTGAACGACAATCAACTTATCGGGGAAATTCCTTCGTCGATCGGTGACTTGCTTAGTCTTTTAGTATGCAATGTGTCTAACAATAAGCTGATAGGAACTGTTCCAGACACAACTACATTTAGAAAGATGGATTTCTCGAATTTTGCTGGGAACAACGGTTTGTGCCGCGTAGGTACTAATCAATGTCATCCATCTCTAGCTTCATCTCATCGCGAAAAGCCAGCGAAAGACGGTTTGTCGAGGGAAAAGATAGTGAGCATTGTTTCTGGTGTGGTTGGTTTTGTTTCTCTTGTTTTCATTGTTTGCATATGTTGGACTATGATGAAACGCCGCCGCAGCGACTCTTTCGTTTCAATTGAAGAACAAACAAAGCCTCATGTTCTAGATGATAGCTACTACTTTCCGAAAGAAGGCTTCACTTACAATGATCTCTTGGAAGCTACTGGAAATTTTTCGGAAGACGAAGTTATAGGAAAAGGAGCTTGTGGAACTGTCTACAAAGCTGTTATGAATGATGGTGAAGTCATTGCAGTCAAGAAGCTGAATGCACGCGGCGGAGAAGCAGGAAGCGTCGACCGAAGCTTCATTGCGGAGATTTCAACTCTCGGAAAGATTAGGCACAGGAACATTGTGAAGCTGCATGGATTTTGTTTTCACGAGGATTCGAATCTTCTGTTGTATGAATACATGGAAAACGGAAGCCTCGGAGAAAAACTTCATTCGAGTTCGAAAAAATGTTCATTGGAGTGGAATGTTCGATATAAAATTGCGCTAGGAGCAGCAGAAGGTTTATGCTATCTGCATTATGATTGTAAGCCTCAAATCATTCATCGCGATATCAAGTCAAACAACATTTTGCTTGATCAAAGTTTTCAGGCTCATGTTGGAGACTTTGGATTGGCGAAATTGATTGACTTTTCATTCTCGAAATCTATGTCTGCTGTGGCCGGATCATATGGATACATTGCTCCAGAATATGCTTACACCATGAAGGTGACAGAAAAATGTGACATATATAGTTTCGGGGTAGTTTTGCTGGAGCTAGTAACGGGAAGGTCACCGGTTCAACCATTGGAACAAGGCGGGGATTTAGTGAATTGGGTGAGAAGATCGATTCAAGCATCCACGCCTACATTTGAATTATTCGACAAGAGATTGAATCTGGACGAACAAAGAACCGTTGAAGAAATGTCTCTTATTCTCAAAATCGCGCTGTTTTGCACAAGTGCGTCTCCGCTTAATAGGCCTACAATGAGAGAGGTTATTGCGATGTTGATTGATGCGAGGGAATACGTCAACCAATCATCGCCAACCTCTCCTTCGTCTGAAACTCCACTCGACGAAGATAAAAGTTCTTCTTCCAAAGATGATGGCCTTCAGTTGTGA 3366 0.404 MAFDSSFHSKNVFFNFYYTMILLFSLGMFLVGSINEEVSILLKFKASLIDSNDNLVDWNPSDASPCNWTGVYCSGSVVTSVTLHNLTLSGNLSPSICNLPWLTELNVSKNFISGQIHEAFFVTCDKLEVLDLCTNRFHGAFLSLVWKIRTLRKLYLCENYMYGEIPEDIGELTSLEELVIYSNNLTGTIPSSISKLKKLRVIRAGLNGLSGKLPSEISECESLETLGLAQNQLTGSIPKELQKLQSLTNLILWQNSFSGELPLEIGNISSLELIALHQNLLVGGIPREIGRLSRLKRLYMYTNQLNGTISAELGNCTNAIEIDLSENHLIGIIPKELGQISNLTLLHLFENNLQGDIPKELGNLRLLKNLDLSLNHLTGRIPLEFQNLELMQDLQLFDNQLEGVIPPHLGAVKNLTILDISSNNLVGMIPIHLCEYQKLQFLSLGSNRLFGNIPYSLKVCKSLVQLMLGDNLLTGSLPVELYGLHNLTALELHQNRFSGLISPGIGQLRSLERLHLSDNYFSGFLPSEIGNLSQLVTFNVSSNRFGGSIPDELGNCVRLQRLDLSRNKFTGMLPGSIGNLVNLELLKISDNMLFGEIPGALGDLIRLTDLELGGNRFSGTIPFHFGRLSALQIALNLSHNNLSDTIPDSLGSLQMLESLYLNDNQLIGEIPSSIGDLLSLLVCNVSNNKLIGTVPDTTTFRKMDFSNFAGNNGLCRVGTNQCHPSLASSHREKPAKDGLSREKIVSIVSGVVGFVSLVFIVCICWTMMKRRRSDSFVSIEEQTKPHVLDDSYYFPKEGFTYNDLLEATGNFSEDEVIGKGACGTVYKAVMNDGEVIAVKKLNARGGEAGSVDRSFIAEISTLGKIRHRNIVKLHGFCFHEDSNLLLYEYMENGSLGEKLHSSSKKCSLEWNVRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDQSFQAHVGDFGLAKLIDFSFSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVNWVRRSIQASTPTFELFDKRLNLDEQRTVEEMSLILKIALFCTSASPLNRPTMREVIAMLIDAREYVNQSSPTSPSSETPLDEDKSSSSKDDGLQL 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00761 1121 Gene3D Phosphorylase Kinase; domain 1 773 889 - -
Vivi4g00761 1121 SMART LRR_typ_2 292 316 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 532 556 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 508 531 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 412 436 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 580 604 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 172 196 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 557 579 IPR003591 -
Vivi4g00761 1121 SMART LRR_typ_2 653 677 IPR003591 -
Vivi4g00761 1121 FunFam Predicted protein 190 285 - -
Vivi4g00761 1121 MobiDBLite consensus disorder prediction 1093 1107 - -
Vivi4g00761 1121 SUPERFAMILY L domain-like 381 718 - -
Vivi4g00761 1121 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 418 726 - -
Vivi4g00761 1121 SUPERFAMILY L domain-like 75 405 - -
Vivi4g00761 1121 Gene3D Transferase(Phosphotransferase) domain 1 890 1105 - -
Vivi4g00761 1121 SUPERFAMILY Protein kinase-like (PK-like) 788 1085 IPR011009 -
Vivi4g00761 1121 SMART serkin_6 811 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00761 1121 Gene3D Ribonuclease Inhibitor 34 313 IPR032675 -
Vivi4g00761 1121 Pfam Protein kinase domain 812 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00761 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Vivi4g00761 1121 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Vivi4g00761 1121 MobiDBLite consensus disorder prediction 1093 1121 - -
Vivi4g00761 1121 FunFam Nuclear pore complex protein NUP107 34 189 - -
Vivi4g00761 1121 Gene3D Ribonuclease Inhibitor 317 392 IPR032675 -
Vivi4g00761 1121 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 776 889 - -
Vivi4g00761 1121 Gene3D Ribonuclease Inhibitor 393 730 IPR032675 -
Vivi4g00761 1121 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 890 1102 - -
Vivi4g00761 1121 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 336 1086 - -
Vivi4g00761 1121 ProSiteProfiles Protein kinase domain profile. 811 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00761 1121 Pfam Leucine rich repeat 606 666 IPR001611 GO:0005515
Vivi4g00761 1121 Pfam Leucine Rich Repeat 558 580 IPR001611 GO:0005515
Vivi4g00761 1121 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 286 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00761 Vivi-Chr4 17313466 17318150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00761 59 1099 Receptor kinase-like Gene Family AT1G73080 37.177 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi4g00761 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00761 - - gmx:100818311 1722.6