Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00757 ATGGCTGATGAAGTCACTCTTCTGGATTACTGGCCAAGTCCATTTGGGATGAGGCTCAGAATAGCCCTTGCTCAAAAGGGTATCAAGTATGAGTATAAAGATGAAGACTTGAGCAACAAGAGTCCTTTGTTGTTAAAGATGAACCCTATTCACAAGAAAATTCCTGTTCTCATTCACAATGGAAAACCTATCTGTGAATCTCTAATTGCAGTTCAGTATATTGATGAGGTTTGGAATGATAAATCTCCTTTGTTACCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTGATTTTGTTGACAAGAAGGTCTATGAAAATGGAAGGAACCTTCTTTGGACAAAAAATGGAGAAGAGAAAGAAGCTGCAAAGAAGGAATTCATAGAAGTGCTCAAAGTGTTGGAGCAAGAGTTGGGAGACAAGAGTTATTTTGGAGGAGAGAAGCTTGGTTATGTGGATGTTGCACTTATTCCATTCTACACTTGGTTTAAAGGTTATGAGACTTTTGGTAATATCAATATAGAGAAGGAGTGTCCCAAGTTTATTGGTTGGGCTAAGAGATGTATCAAGATTGAGAGTGTTTCTAAGGCTATTCCTGATCAAGATAAGGTCTATCAGTTCATTGTCGAGGTCAGGAAGAAGAGGGGCATTGAGTAG 663 0.3906 MADEVTLLDYWPSPFGMRLRIALAQKGIKYEYKDEDLSNKSPLLLKMNPIHKKIPVLIHNGKPICESLIAVQYIDEVWNDKSPLLPSDPYQRSQARFWADFVDKKVYENGRNLLWTKNGEEKEAAKKEFIEVLKVLEQELGDKSYFGGEKLGYVDVALIPFYTWFKGYETFGNINIEKECPKFIGWAKRCIKIESVSKAIPDQDKVYQFIVEVRKKRGIE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00757 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Vivi4g00757 220 Pfam Glutathione S-transferase, C-terminal domain 121 189 - -
Vivi4g00757 220 Gene3D Glutaredoxin 1 87 - -
Vivi4g00757 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 219 IPR010987 -
Vivi4g00757 220 FunFam Tau class glutathione S-transferase 1 87 - -
Vivi4g00757 220 CDD GST_N_Tau 5 78 - -
Vivi4g00757 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Vivi4g00757 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vivi4g00757 220 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Vivi4g00757 220 Gene3D - 88 220 - -
Vivi4g00757 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vivi4g00757 220 FunFam Glutathione S-transferase U20 88 220 - -
Vivi4g00757 220 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Vivi4g00757 220 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vivi4g00757 220 SFLD Main (cytGST) 2 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00757 Vivi-Chr4 17195882 17196979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00757 1 220 Glutathione S-transferase Gene Family AT1G17180 66.818 6.80e-115 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00757 K00799 - gmx:547520 377.096