Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00735 ATGGCTTCATTCCAACCCTTCAACTTTGAAACTCAAATTCCCCAAGAGCTTTTGATATCTCAAATCATGCAAATTCATGCAACAATCTCAAAGCTAGAATCTCTTAGACCATCAAAACAAGTCAACACCCTTTTGACTCACTTAGTCAAACTTTGCACCCTCCCTTCATCCATTGACATTGAAGCCTTACCACAAGAGGTTAAGAAAATGCGTGAGAGCCTCATTCCCCTTTGTGGCAAAGCCGAAGGACTTCTAGAGCTCGAATTCTCAACTTTCATTAGTCTCACTCCAAATCCAATGAAAAACCTAACCCTTTTTCCTTACTACGGAAACTATGTTAAACTAGCAAACTACGAGTACAAAATTCTCGAACAAAACGGGGTCACAAACGCGAAAAAAGTAGCTTTCATTGGTTCCGGTCCAATGCCGCTAAGTTCAATCATATTAGCAACTCATCACATGGAATCAACACAATTTGATAACTTTGATATTGATGAGAAGGCTAATGAGGTTGCTAGCAAGATTGTGGATTCGGATAAAGCGCTTGAGAAGAGGATGAAGTTTGTGACACAAGATGTTATGGAAGTTAAAGAGAGGTTGGGAGAATATGATTGCATATTTTTGGCAGCGCTTGTTGGAATAAGTAGAAGTGAAAAAGTGAAGATTTTGGGACATATAAGAAAGCATATGAAAGAAGGTGGTGTTTTGGTTGTGAGAAGTGCAAAAGGGAGTAGAGGTTTTTTGTACCCTATTGTTGAAGAAGATGATATGGTGAATTTTGAAGTGCTTACTATCTTCCATCCAACAGATGATGTGATTAACTCGGTTATTCTTCTTCGTAAGCCTTATGCTTGA 855 0.3871 MASFQPFNFETQIPQELLISQIMQIHATISKLESLRPSKQVNTLLTHLVKLCTLPSSIDIEALPQEVKKMRESLIPLCGKAEGLLELEFSTFISLTPNPMKNLTLFPYYGNYVKLANYEYKILEQNGVTNAKKVAFIGSGPMPLSSIILATHHMESTQFDNFDIDEKANEVASKIVDSDKALEKRMKFVTQDVMEVKERLGEYDCIFLAALVGISRSEKVKILGHIRKHMKEGGVLVVRSAKGSRGFLYPIVEEDDMVNFEVLTIFHPTDDVINSVILLRKPYA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00735 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Vivi4g00735 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 242 IPR029063 -
Vivi4g00735 284 Gene3D Vaccinia Virus protein VP39 17 282 IPR029063 -
Vivi4g00735 284 PANTHER NICOTIANAMINE SYNTHASE 3 15 281 IPR004298 GO:0030410|GO:0030418
Vivi4g00735 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Vivi4g00735 284 CDD AdoMet_MTases 162 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00735 Vivi-Chr4 16226748 16227836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00735 15 281 Nicotianamine Synthase Gene Family AT5G56080 52.030 1.01e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00735 K05953 - gmx:100819726 461.455