Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00731 ATGGCAAACGAGGTGATTCTGTTGGATAAATGGGCTAGCATGTATGGTATGAGGGCTAGGATTGCATTAGCTGAAAAAGGTATTAGCTATGAATCCAGAGAAGAAGATTTTAATAATAAGAGTGATTTGCTTCTTCAATCCAACCCTATTCATAAGAAGATTCCAGTTCTTATCCATAATGGTAAATCCATTTCTGAATCTGGAATTATTGTCCAATACATTGATGAGGTTTGGAATGACAAAAATCCATTCTTTTCCTCTGATCCTTATGAGAGAGCTCAAGCTAGATTTTGGGTTGATTACATTGACAAAAAGGTTTTTGATACTTGGTTGAAAGTGTGGCTTTCAAAAGGTGAAGAATATGAGGAAGCTAAGAAGGAGTTGATCTCTATTTTTAAGACACTAGAGGGGACATTAGGTGACAAGAATTTTTATGGTGGTGAGAGTTTTGGGTATCTTGATATTGGTTTGGTTCCTTTTTATAGCTGGTTTTATACTTTTGAGAAATATGGTAACTTCAAATTTGAAGTGGAGACTCCTAAACTCGTGGCTTGGGGAAAGAGATGCGTTGAGAAAGAAAGTGTTTCGAAATCACTTCCGGATGAGAAGAAGATATATGAGTATGTTGTGGCCGGGAAGAAAGCACTTGGGTATGAAGATTAG 663 0.368 MANEVILLDKWASMYGMRARIALAEKGISYESREEDFNNKSDLLLQSNPIHKKIPVLIHNGKSISESGIIVQYIDEVWNDKNPFFSSDPYERAQARFWVDYIDKKVFDTWLKVWLSKGEEYEEAKKELISIFKTLEGTLGDKNFYGGESFGYLDIGLVPFYSWFYTFEKYGNFKFEVETPKLVAWGKRCVEKESVSKSLPDEKKIYEYVVAGKKALGYED 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00731 220 Gene3D Glutaredoxin 1 87 - -
Vivi4g00731 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vivi4g00731 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vivi4g00731 220 FunFam Glutathione S-transferase U20 88 219 - -
Vivi4g00731 220 SUPERFAMILY GST C-terminal domain-like 76 211 IPR036282 -
Vivi4g00731 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vivi4g00731 220 Pfam Glutathione S-transferase, C-terminal domain 120 185 - -
Vivi4g00731 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Vivi4g00731 220 Gene3D - 88 219 - -
Vivi4g00731 220 CDD GST_N_Tau 5 78 - -
Vivi4g00731 220 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Vivi4g00731 220 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Vivi4g00731 220 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Vivi4g00731 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Vivi4g00731 220 FunFam Tau class glutathione S-transferase 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00731 Vivi-Chr4 15916353 15917162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00731 1 214 Glutathione S-transferase Gene Family AT1G78370 64.953 3.56e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00731 K00799 - gmx:547950 347.821