Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00712 ATGGATGCTGTTATTTCATTTGCTGGTAAAATTGCTGAACCTGTGGTTGTACCTATTAGACGTCACTCTGGTTACATAGTCTACTACAAGGACAACCTTAAAAAGATGAAAACTGATGTCCAGAATCTAGAGGGTAAAAAACATATTGTGCAACACAAGGTTGAAGAGGCTATAAGGAACGGCGAAGAGATTGAAATTATTGTCCAGAACTGGCTGAACACAGTTGACAACACTGTTGCTGAGGCAAATCAACTTATTGACAGTGAAGGCCATGCAAAAGCTCAATGTTCTATGGGGCACTTTCCAAATCTGTGCACAAGGTATCAGCTGGGTAGCAAGATCAAAAAGATGATACTAGGTATTTCTAAACTAGAAGAAAGAAATTTCGACCAAGTTTCTCACCGTGCTGCTTCTCAAGTCACGGTCACACCGTTCGGTAGAGGTTATGAGGCCCTGGACTCCAGAACATGCATGCTGAATGAGATTATGATGGAATTGAACAATCCTAATATCTTTATTATTGGTGTGTACGGGATGGGTGGCGTGGGCAAGACAACACTAGTGAAACAGTTAGCTTGGCAAGCAAGGAATGATGGGTTATTTGATACTGTTGTTATGGCTACTATAAGTGGTTCGCCGAATCTTGAAAAGATTCATGAACAAATTGCTGATGACTTGGATCTGAAATTTAATAAGACGGTAAAAGAGGGAAGAGCAAGAGAATTACGCGGAAGGATAGGCAAGGAGAAGAGTATTCTGGTTATTCTGGATGACATTTGGGGGAAACTTGATTTGGAAGAATTGGGGATTCCTTTTGGCGACGATCACAAAGGATGTAAGTTGGTGGTAACATCGAGAGATCTTCACGTGTTGACTTGTGAAGTGGGGACTCAGAAAGAATTCAGACTTGATGTTCTACTCGAGGAGGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTGTTCAAGAGTTTAATATAAAGCCTATTGCAGTAAAAGTGGCCAAATGTTGTGCTGGTTTGCCGCTTTTGATAGTTACGGTGGCAAAGGCTTTGAGAAAAAAAGACGCCTTTGCGTGGAAGGATGCCTTGAATCAATTAGAGAGATTCGATCAAGGAGGTTTGCTTGATAAAGTTTACTCTACTCTGGAATTGAGTTATAATTGTTTAGAGAGTGAGGAACTGAAGTTGCTATTCTCATTCATCGGTTCATTTGGACTCGATGACATCCACAATGGACAACTGATTATATTTTATTGGGGATTAGGCTTGTTTAGAAACTGTCACACGTTGAGAGACGCAAGAACCAGATACCACAAATTAGTAAACGACCTCAAGGCCTCTTCGTTGTTGCTCGAGTCCAGAGCTGAAGTGATTGGAATTCATGATCATGTACGACATGTGGCTAAATCAATTGCATCCAGGACTCGGCCAACCTATGGCATTCAAAGGTGTAGTAAAGTCGAAGAATGGCCAGAGATGGATCAGCTTCGAAAATACCATCAAATAATTTTGCCTTGGTCTTATATTTACAAGCTTCCTGAGAAGCTGGAGTGCCCAGAGTTGAAGCTACTTCTACTTGAAAATATAGGTGATTATTTGAAAGTCCCTGATAACTTCTTCTCCGGGATGATAGAGTTAAAGGTCATTAGTTTATTCGGAGTGGAGTTTTCTCCTTCTCCACCACTATCTCTTTGTCTCTTGACAAAACTCCAAACACTGGTTCTTGCTGGAAGTTTGTTAGGAGACATATCAATAATTGGAGAGCTGAAAAGTTTGAAGATTCTCAGGCTTGAAAGATCTGATCTTAAAGAACTCCCGAAAGAAATAGGACAACTAACTAATCTTCAATTTCTGAATATAACCAACTGCCCTAGACTGAGATTCATTCCTGCAAATGTTATTTCGAGCTTAACGTGTTTGGAAGAGTTGTACATGGGGAACTGCTTTATCCAATGGGATGTCAAGGGAAGCAAAAATCAAAGCGGCAATGCAAGTCTAGAAGAGCTTAGGAATCTGTCTCATCTAACTGCTTTAGACATAATGATTCAAGATGCTTCGGTTTTGCCAAGGGACTTGCAGGTGTTTGAAAAGCTTGAAAGGTACAACATATTTGTTGGTGATAAGTGGAAATGGTCATTGGCATGGTCTGGAGGTGTTCCTGAATCTTCAAGAGTACTTAAGCTCGAGGACAGTAGGAGTTTAAGCATTCTTTCGGATCGTGGATTTAACTTCTTGTTGAATTCAGCCGAGGACATGTGCCTTGCCAAAATACATTGTGTTGGAAATGTCTTTTACGAACTGAATAGGAAAGGTTTTCCGCAATTAAAGAATTTGTGCATTCAAGACAGTACTGAACTGAAGTACATCACTGACTCGTCCGGGTATGTTCATCCTGATCCGGCTTTACCCAACTTAGAGACTTTGGCTCTTCAAAATCTGATTAATCTGGAAGAAATATGCCACGGGCCAGTTCCAATTCAATCTTTTACCAAACTAAGATCTTTTGAAGTCAAAGGTTGTGACAAGTTGAAGAACCTGTTATGGTATTCCCTTGTTAGCAGCCTTCCTCGACTTAGTGAAATGAAAGTTTCTAATTGCAAAATGATTACCGAAATCATAGCTATGGAAGCATCTGAGGCGGATAACGAAAACGACAGGACCATGTTCCCCAAATTGCATTCTCTTGAACTTGAATGTTTGCCTAGTCTCATAAGTTTATGTTCTGCGCCATTGCCAGCTCATAATAGTCCCATGGCACTATTTGATCAAAAGGTTGGGATGCCCTGCCTTGAACTATTGAAGCTGTCTAAGATCAATTCTAGGAAACTGTGGGACGACATACTACCGGGTCGTTCTTGCATTCAAAACTTGACGAGTTTGACAATCGACAAATGTGGTATCAGAACGTACGCATTCTCATCCTCAATGGCTAGAGAACTTGTGAAACTGACGTATCTTGGAATTAGTAATTGCCAAATGTTGGAGGAGATATTTGTCTCAGATGAAAACTCAGGTTGTCTTCCTTTATCTCAGCAACCGTTCTCGAATAATGAGGTTATATTTCCAAACTTGGAGACGTTGGAAATCTCCCACATGGAACACTTGAAGTCAATATGGCACAATCAACTAGCTCCAAACTCCTTCTGCAAACTGAAACAGTTGAAAATTAAATTCTGCAGTGAAATATCAATTGTTTTTCCTTCTTGCGTGCTTGAAAAATTACAGAATCTGAAAACAGTGACTGTAACCGATTGTCCTGCTCTAGAAGTTGTATTCGAAACTCAAGGTGGTGGTAGACAAACAAGGTTGGAAATGCATTTGAAAACTCTCAATTTGAAAAATTTACCAATGCTGAAACACATATGGAGTGGGAATCCCAAAGAAAGCTTCAAGTTTCAAAACCTCTGCCTATTGACAGTTATTACATGCAAAAGCCTCAATCATGTTTTCCCCCTTGCTGTTGCCAAAGAGCTTCAGAATCTCCAAAAGCTTTATATAGCAGAATGTGGCATAGAGATGGTTGTGGCACATGATGAAATGGCTGACACAGTTCCGATACTTATCTTCCCTGAATTAACAGATTTGAGTTTTCGAAATTTGACACAACTTCGAAGCTTCTACTGTGGCTTACATACCTTGGATTGTCCCGTTTTAAGACGCGTGGATGTTCTTCATTGTGACAACCTCGTACTTTTCAAGCCAAAGTCTCTAAATTGCCAAGACATTGTCCCAGTTGATGTACTACCCCTTCTCTCAATTGAAAAGGTTGCGCCCAACGCAAGCGAGCTTATTCTGAACATCAAAGATGTCACTATGTTATGCAATGGTCAACTTAATGATGAGCATATCTACACAGTAACAGCTCTTCGCCTACGATGTTTTCATGACGAGTCTGACAAATTTCCAGCCGGTTTCCTCCAAAGGTTTATCAATCTCAAAAAGCTTTATGTGACATGTAGTTCCTTCACAGATATTTTATCACGTGACAACCACGGGTTTATATGGCAAGAGAAATCTGAGGTGCAACCAGTTATTCAACGTATCGAAACTTTGTGTTTAGTTAAATGCTCTAGACTGAAGGAAGTAGTTCCATCCTCAATGCTGTTTGAGAGTTTAGAGCAGTTGGAGGTGGGGAACTGTGCTGGATTGGAAAATATTTTGAAATCATCAACAGTTGCTAATTTACCAAAACTTTGGAAATTATGCATAGATGGTTGTGTTAAGATTGAAGAAATAGTTGCAAGTGAAGATGAAAACGATGCGTCTGAGCTAGCTTTGAAATTGCGGTATCTGCGATTAACAAACTTACCAAGGCTAAGCAGTTTTTGCAAGGGAAAACATGACTTCAAATTTCCTCGACTGATGACATTATATGTTATAAATTGTCCCGTGATGGAAACTTTCTCACACGGAATGTTGAACGCGCCACAGCTCTTAGAAGTACGTGTAACGCCGCAAGCTGAATGGGAATGGAATGGTGACCTTAACACTACAATAAAAAAAATTGCAGCGAAAAGGGTAATGTGA 4536 0.4015 MDAVISFAGKIAEPVVVPIRRHSGYIVYYKDNLKKMKTDVQNLEGKKHIVQHKVEEAIRNGEEIEIIVQNWLNTVDNTVAEANQLIDSEGHAKAQCSMGHFPNLCTRYQLGSKIKKMILGISKLEERNFDQVSHRAASQVTVTPFGRGYEALDSRTCMLNEIMMELNNPNIFIIGVYGMGGVGKTTLVKQLAWQARNDGLFDTVVMATISGSPNLEKIHEQIADDLDLKFNKTVKEGRARELRGRIGKEKSILVILDDIWGKLDLEELGIPFGDDHKGCKLVVTSRDLHVLTCEVGTQKEFRLDVLLEEDSWKLFEKMAGDVVVQEFNIKPIAVKVAKCCAGLPLLIVTVAKALRKKDAFAWKDALNQLERFDQGGLLDKVYSTLELSYNCLESEELKLLFSFIGSFGLDDIHNGQLIIFYWGLGLFRNCHTLRDARTRYHKLVNDLKASSLLLESRAEVIGIHDHVRHVAKSIASRTRPTYGIQRCSKVEEWPEMDQLRKYHQIILPWSYIYKLPEKLECPELKLLLLENIGDYLKVPDNFFSGMIELKVISLFGVEFSPSPPLSLCLLTKLQTLVLAGSLLGDISIIGELKSLKILRLERSDLKELPKEIGQLTNLQFLNITNCPRLRFIPANVISSLTCLEELYMGNCFIQWDVKGSKNQSGNASLEELRNLSHLTALDIMIQDASVLPRDLQVFEKLERYNIFVGDKWKWSLAWSGGVPESSRVLKLEDSRSLSILSDRGFNFLLNSAEDMCLAKIHCVGNVFYELNRKGFPQLKNLCIQDSTELKYITDSSGYVHPDPALPNLETLALQNLINLEEICHGPVPIQSFTKLRSFEVKGCDKLKNLLWYSLVSSLPRLSEMKVSNCKMITEIIAMEASEADNENDRTMFPKLHSLELECLPSLISLCSAPLPAHNSPMALFDQKVGMPCLELLKLSKINSRKLWDDILPGRSCIQNLTSLTIDKCGIRTYAFSSSMARELVKLTYLGISNCQMLEEIFVSDENSGCLPLSQQPFSNNEVIFPNLETLEISHMEHLKSIWHNQLAPNSFCKLKQLKIKFCSEISIVFPSCVLEKLQNLKTVTVTDCPALEVVFETQGGGRQTRLEMHLKTLNLKNLPMLKHIWSGNPKESFKFQNLCLLTVITCKSLNHVFPLAVAKELQNLQKLYIAECGIEMVVAHDEMADTVPILIFPELTDLSFRNLTQLRSFYCGLHTLDCPVLRRVDVLHCDNLVLFKPKSLNCQDIVPVDVLPLLSIEKVAPNASELILNIKDVTMLCNGQLNDEHIYTVTALRLRCFHDESDKFPAGFLQRFINLKKLYVTCSSFTDILSRDNHGFIWQEKSEVQPVIQRIETLCLVKCSRLKEVVPSSMLFESLEQLEVGNCAGLENILKSSTVANLPKLWKLCIDGCVKIEEIVASEDENDASELALKLRYLRLTNLPRLSSFCKGKHDFKFPRLMTLYVINCPVMETFSHGMLNAPQLLEVRVTPQAEWEWNGDLNTTIKKIAAKRVM 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00712 1511 Gene3D Ribonuclease Inhibitor 510 918 IPR032675 -
Vivi4g00712 1511 Gene3D - 144 303 IPR027417 -
Vivi4g00712 1511 Pfam NB-ARC domain 161 390 IPR002182 GO:0043531
Vivi4g00712 1511 SUPERFAMILY L domain-like 487 907 - -
Vivi4g00712 1511 FunFam Probable disease resistance protein At1g61300 147 298 - -
Vivi4g00712 1511 Gene3D - 305 393 IPR042197 -
Vivi4g00712 1511 Gene3D Ribonuclease Inhibitor 919 1045 IPR032675 -
Vivi4g00712 1511 Coils Coil 26 60 - -
Vivi4g00712 1511 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1285 1476 - -
Vivi4g00712 1511 SUPERFAMILY L domain-like 929 1238 - -
Vivi4g00712 1511 SUPERFAMILY RNI-like 1288 1483 - -
Vivi4g00712 1511 Gene3D Ribonuclease Inhibitor 1074 1246 IPR032675 -
Vivi4g00712 1511 Gene3D Ribonuclease Inhibitor 1261 1491 IPR032675 -
Vivi4g00712 1511 PRINTS Disease resistance protein signature 340 354 - -
Vivi4g00712 1511 PRINTS Disease resistance protein signature 613 629 - -
Vivi4g00712 1511 PRINTS Disease resistance protein signature 173 188 - -
Vivi4g00712 1511 PRINTS Disease resistance protein signature 246 260 - -
Vivi4g00712 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00712 Vivi-Chr4 15568059 15579008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00712 170 457 WRKY Transcription Factor Family AT5G45050 25.902 2.43e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00712 - - mtr:25487104 2104.72