Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00684 ATGGCAAGTGAAAGTGCTGAATTACCACCGGTTACCCCGGAGGTAACTACGTCGCCAGTGGTTGAAAGACGAAAGGCGGGCTCTGGAAAAAGCAGCGAAAAAGTTGTTCCGCGGTATCTCAGAGCTTCCACCGGTTCGTGTCATGATAGATGTAAATATGGGGGGAACCATTCTATTGATCCGAAGGAAAGACGTTCGATACCTGACAGAGCCACGAGAAAACAACTTTACCACCAGACTCGTGGAGAGAGCATTGGTGGGATGGTTGCGAAGTCCAGACTATCGGTTGATTCCAAGCTAACAAAGATGTCAACGGATGTACTCAAAGAATCGGCTGATTCTAAGCCGAGAAAGATGTCAACGGTCGTACTCAAAGAAGCAGTCGGTTCCAAGGCTCGGACTTCTGATTCCTTAGAAGCCAAAAACAGGAAGAAAACATCATCTGTTGAGGTCAAACCATCACTAGTATCGAAGTCGCTTAATTCTCCATCAACAAGTCAAGAAATTTCATCATCAATTGATAAGGAGATGCAACTTCTGAAGACTCCTTCAAAATCAATTTCGAAGGTTGAAAGTATATCAAAACCAACCTCTCAAGTCAAAACGTCGTCGAAATCAACTGTCGTCCCGGTGGAAGCTGTGCCAAAATCAATTCTCAAGAAAGTGGAAAATCCTTCAAAATCAATCTCCAAAGTCAAAACTTCATCGAAATTTACTTCCAAAACGGAAGGAACTTCATCACATTTACGTTCTTCAAATGGCACCGAAATGAAGTTGTTGACAAAGCCTTCGTCGTCATTGAGTTCAATTCGCGGTGCAACGAACAAAGGAAGTAACGAGATCAAGACGGAAAAGAAAGTAGCTTCCTTCAAAGCATCTCCAAGAAAACTGAAAGTACCTATAAAAGCTTTGTCATCTCCTAGAGCCTCTATCAAGCACAAGAATCTGAAAATTGTGTCTCCTCTTAAGAATCAGAAAGCTGCGACAAAAGTCGAACTTGAGGAACACGAGAATCCAAGGAATCAGAAGACTTTGACAAATGTCGAACTCGAGGAAAACAAAATCCATGAGGTAAAGGAAAAGACTTTGTACGTCATCGAGACGGAAACTGAAAACAAAACTTTGCAATCTAATCAAAACGCAACCTACGATGATGATGAATCGTACCTCCCTCAGTTGTTGACGCCCGAGTCTTCATCAACCTCAGTTACTCAATCCATATCCGAAGAAAACCAAGACGAATCTGAATACACAACTAGTGAATACGAGCTGGCCTCTTTATCGGGAAACTCTGAAATCGAAAGCATTATAAACAACGAGACTTTAATGGTCGACAAGCCGGGAAAGGTTAAGGAAGTAGAAGACAAGGATAGCGAAATGGCGAAATTAAAGCTCAGAAAAGGGAAAGTGGTTGATAATCAAAGTGAGAGAAATACTCCAAGAAAGCTTAAGTTTCGGAGAGCGAAAGCATTGGAAGAGAAAGCAAATGTTAAAGAGAAAGTTGTGCTGAGACACCAAGATTTCGAGGACAAGAAAGATGCACAAGGATTGTTTAACAATGTGATTGAGGAAACTGCAAGTAAACTTGTTGAAGCTAGGAAGAGTAAGGTCAAAGCATTGGTTGGTGCATTTGAAACTGTTATCTCTCTTCAAGAGAAATAA 1662 0.4158 MASESAELPPVTPEVTTSPVVERRKAGSGKSSEKVVPRYLRASTGSCHDRCKYGGNHSIDPKERRSIPDRATRKQLYHQTRGESIGGMVAKSRLSVDSKLTKMSTDVLKESADSKPRKMSTVVLKEAVGSKARTSDSLEAKNRKKTSSVEVKPSLVSKSLNSPSTSQEISSSIDKEMQLLKTPSKSISKVESISKPTSQVKTSSKSTVVPVEAVPKSILKKVENPSKSISKVKTSSKFTSKTEGTSSHLRSSNGTEMKLLTKPSSSLSSIRGATNKGSNEIKTEKKVASFKASPRKLKVPIKALSSPRASIKHKNLKIVSPLKNQKAATKVELEEHENPRNQKTLTNVELEENKIHEVKEKTLYVIETETENKTLQSNQNATYDDDESYLPQLLTPESSSTSVTQSISEENQDESEYTTSEYELASLSGNSEIESIINNETLMVDKPGKVKEVEDKDSEMAKLKLRKGKVVDNQSERNTPRKLKFRRAKALEEKANVKEKVVLRHQDFEDKKDAQGLFNNVIEETASKLVEARKSKVKALVGAFETVISLQEK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00684 553 MobiDBLite consensus disorder prediction 126 209 - -
Vivi4g00684 553 MobiDBLite consensus disorder prediction 149 209 - -
Vivi4g00684 553 Coils Coil 341 361 - -
Vivi4g00684 553 PANTHER EMB|CAB62594.1 14 553 - -
Vivi4g00684 553 MobiDBLite consensus disorder prediction 53 73 - -
Vivi4g00684 553 MobiDBLite consensus disorder prediction 229 289 - -
Vivi4g00684 553 MobiDBLite consensus disorder prediction 229 277 - -
Vivi4g00684 553 SMART CaM_binding_2 459 549 IPR012417 GO:0005516
Vivi4g00684 553 MobiDBLite consensus disorder prediction 1 73 - -
Vivi4g00684 553 MobiDBLite consensus disorder prediction 373 423 - -
Vivi4g00684 553 Pfam Plant calmodulin-binding domain 446 549 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00684 Vivi-Chr4 15029344 15032167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00684 499 547 Calmodulin-binding Proteins AT2G38800 46.000 7.92e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00684 - - vvo:131598867 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00684 4 15029344 15032167 Vivi6g00370 6 9260532 9262198 PCT