Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00632 ATGGTGAATGCAATAAAATTAGCCATTGGTGATGCAGTATTAACCTTCATATGGATTTTCATTTCTTCAACCCTAGGGTTAATCACCTCAGAAATTCTGAAAGCTTTTGATCTTGAATTTGTGAATTATAATGGTGTCAATTACCCTTTTATTATAATCACTACTTTGTTGATTTTTGTTATTATATTCACTTTCACTGCTATTGGTAATGCTATGGGTGGTGCCAGTTTCAATCCTACAGGGAATGCTTCTTTCTATGCTGCTGGCCTTGGTTCTGATACCCTTTTCTCTATGGCTCTTCGTTTCCCTGCTCAGGCATTAGGTGCAGTGGGTGGTGCTATGGCAATTATGGAAGTAATGCCGCCAAAATACAGACACATGATTGGAGGACCTGCTTTGAAGGTTGATTTGCATACAGGAGCTATTGCAGAAGGAGTGTTGACATTTCTAATCACTTTTGTCGTTCTCTTCATCATAATCAAAGGTCCTCGTAGTGAGTTCCTCAAGACTTTGGTGATGTCCATTTCAACCGTGGCTGTGATCGTCGCCGGTTCTGCTTACACCGGACCCTCCATGAATCCTATCCTCGCATATGGTTGGGCATATTTAGACAACTGGCACCACACATGGGATCAATTCTATGTATATTGGATTTGTCCATTCATTGGAGCAATACTTGCTGCTTGGTTGTTTCGTGCTGTCTTCCCTCCACCACAAAAAGTGGTAAAACACAAGAAAGCTTGA 744 0.4113 MVNAIKLAIGDAVLTFIWIFISSTLGLITSEILKAFDLEFVNYNGVNYPFIIITTLLIFVIIFTFTAIGNAMGGASFNPTGNASFYAAGLGSDTLFSMALRFPAQALGAVGGAMAIMEVMPPKYRHMIGGPALKVDLHTGAIAEGVLTFLITFVVLFIIIKGPRSEFLKTLVMSISTVAVIVAGSAYTGPSMNPILAYGWAYLDNWHHTWDQFYVYWICPFIGAILAAWLFRAVFPPPQKVVKHKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00632 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi4g00632 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi4g00632 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi4g00632 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi4g00632 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi4g00632 247 Pfam Major intrinsic protein 5 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi4g00632 247 SUPERFAMILY Aquaporin-like 4 241 IPR023271 -
Vivi4g00632 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Vivi4g00632 247 FunFam Aquaporin SIP1-1 2 247 - -
Vivi4g00632 247 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00632 Vivi-Chr4 13950042 13952488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00632 2 246 Major Intrinsic Protein MIP AT5G18290 52.033 4.95e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00632 K09875 - gmx:100788738 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00632 4 13950042 13952488 Vivi4g00632 4 13950042 13952488 ECH