Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00631 ATGGAAGAATTACCTATTGATTTACCTCCTGGTTTTAGATTCCACCCTAATGATGATGAAATCATTACTTCTTATTTGATCAACAAAGTTTTGAATACAAACTTTAGTGCAATTGCAATTGGTGAAGCTGATTTGAACAAGTGTGAGCCATGGGATTTACCTAAGAAAGCAAAGATGGGAGAGAAAGATTGGTATTTCTTTAGTGAAAGAGATAGGAAGTATCCAACAGGAACAAGAACAAATAGAGCAACTGAATTAGGTTATTGGAAAGCAACTGGAAAAGATAAAGAAATCTATAAAGGGAAAAGTAAACAACTTGTTGGAATGAAGAAAACTCTTGTGTTCTATAAAGGTAGAGCTCCAAAGGGAGAGAAAACTAATTGGGTTATGCATGAGTTTAGATTGGATGGAAAATTAGCAACTTGTAATCTTCCTAAGGATGCAAAGGATGAATGGGTTGTGTCAAGAATCTTCAACAAGAACAACAATGAAATCAAAAAAACATCATCAATTTCCAATCTTTTAAGGATAAACTCAATAAGTGATGATTTATTGGATTTTTCTTCACTTCCATCTCTTATGGATGACACTCCTTTTGAAATCAACAACACCATTGATCATCAACATCATCATCATCATGAAGATTTCAAAGAAACCTATTCTTCATCAAATGGTTACTATTTCCCAAGCTACTTAATCAACAATGAAATCAATCTCACAAACCAAGAGAATTTGAATATTCCAAAAACACCCTTGAGACATAACATGTTATCAAATGACTCTTATATGAATCATCAATGGAACAAAGAGTGCAAGATGGAACAATTCTCTACCAACAATTCTTTGTTAAGTGTTTCACAAGACACATGTTTGAGTAATGAGATAAACAATGACATATCTTCTGTGGTCTCAAAGCAAGAAATTATGGGAAGGAATTCAACTTTGTATGAAGATTTAGATTATTTGATGAATGGATATTGA 981 0.3262 MEELPIDLPPGFRFHPNDDEIITSYLINKVLNTNFSAIAIGEADLNKCEPWDLPKKAKMGEKDWYFFSERDRKYPTGTRTNRATELGYWKATGKDKEIYKGKSKQLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLDGKLATCNLPKDAKDEWVVSRIFNKNNNEIKKTSSISNLLRINSISDDLLDFSSLPSLMDDTPFEINNTIDHQHHHHHEDFKETYSSSNGYYFPSYLINNEINLTNQENLNIPKTPLRHNMLSNDSYMNHQWNKECKMEQFSTNNSLLSVSQDTCLSNEINNDISSVVSKQEIMGRNSTLYEDLDYLMNGY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00631 326 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Vivi4g00631 326 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Vivi4g00631 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 261 - -
Vivi4g00631 326 FunFam NAC domain-containing protein 100-like 17 164 - -
Vivi4g00631 326 SUPERFAMILY NAC domain 7 160 IPR036093 GO:0003677|GO:0006355
Vivi4g00631 326 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00631 Vivi-Chr4 13910220 13912315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00631 2 319 NAC Transcription Factor Family AT5G18270 52.679 2.38e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi4g00631 NAM 3.7e-38 No_clan