Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00604 ATGGATTTCACATCAGGGAAGAATGCATCAGAAAACAACAACAACAACTCAGAAAACTCTCAACAAATCGCTGATTCTTCTTCTCAATTAGCTTCCGATTCCTTCAATATCAAAGAAACCGAAGAGCGTCAAGCACGTGAACTCAAAGCTGGTCTTCACCCTCTAAAGAGCAAGTTTGTATTTTGGTACACTCGCCGGGTACCTGGAATTCGAAATCAATCATACGAGGACAACATAAAGAAGATTGTTGAATTTAGTACGGTTGAAGGATTTTGGGTCTGTTACTGCCATATTTCTCGTCCTTCTTCCTTGCCTAGTCCAACAGATTTGCACCTTTTCAAAGAAGGAATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGAAAATGGATTATACGATTCAAGAAGGCTGTCTCAGGTCGTTTTTGGGAGGACCTGGTGCTTGCTTTAGTGGGTGATCAATTGGATTATGGTGATAACATATGTGGTGCAGTGCTAAGCATTCGATTCAACGAGGATATCGTGAGTATCTGGAACCGCAATGCTTCTGATAATCAGGCTGTAATGGCTTTGAGAGATTCGATTAAGCGTCACTTAAAGCTTCCTCACAGCTACGTTATGGAGTACAAGCCCCATGATGCCTCTCTGCGAGACAATTCATCTTACAGGAATACTTGGTTGAGAGGCTAG 696 0.4253 MDFTSGKNASENNNNNSENSQQIADSSSQLASDSFNIKETEERQARELKAGLHPLKSKFVFWYTRRVPGIRNQSYEDNIKKIVEFSTVEGFWVCYCHISRPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSIWNRNASDNQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00604 231 MobiDBLite consensus disorder prediction 1 31 - -
Vivi4g00604 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 19 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vivi4g00604 231 Pfam Eukaryotic initiation factor 4E 54 211 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vivi4g00604 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 26 224 IPR023398 -
Vivi4g00604 231 FunFam Eukaryotic translation initiation factor NCBP 25 224 - -
Vivi4g00604 231 SUPERFAMILY eIF4e-like 45 227 IPR023398 -
Vivi4g00604 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 109 132 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00604 Vivi-Chr4 12948415 12951897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00604 40 231 Eukaryotic Initiation Factors Gene Family AT5G18110 83.333 5.59e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00604 K03259 - gmx:100499744 405.601