Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00509 ATGGATCATTACAAGGTTCTAGGTTTACACAAAACAGCATCCAAGGAAGAAATCAAATCAGCATTCAAAAAACTCGCGTTTCAATTTCATCCCGATAAGCATTCTCAATCACCGAAAGCTGTGAAAGAGAACGCAACTGTTCGATTCAAACAGGTTTCTGAAGCGTATGAGATTCTCATGGATGATCGGAAACGAGCTGAGTATAATTACCGGTGGCGTTCCGGTGCCGGTGGAAGAAGTGGTTATGGTGGTGGTAATAGCAATTATTATTATTCTCAGTATGGTTATGGATATGGTAGAAGTGGGAAGAGCTATGAGTATAAAAGTGGGTCTGGGTTTAATGGGGGTGGTGGTTTTGCATCTAAGTTTGAGCTTGCTATTAGGATTTTGACGGCGAGGTCTTCTCTTCTCAATCTTGGATTTGCAGCGGCTATATTAGGTGTGATGATTGTTGTTGATACAAGTGGAGAATCCTTATGGAAAATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAACACCATTGACAAAGCAAAAACGTATAAAGAAAATAACACGAATGAACGTCCTTGA 576 0.401 MDHYKVLGLHKTASKEEIKSAFKKLAFQFHPDKHSQSPKAVKENATVRFKQVSEAYEILMDDRKRAEYNYRWRSGAGGRSGYGGGNSNYYYSQYGYGYGRSGKSYEYKSGSGFNGGGGFASKFELAIRILTARSSLLNLGFAAAILGVMIVVDTSGESLWKMQNSGKSFEEAMNTIDKAKTYKENNTNERP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00509 191 FunFam DnaJ domain protein 1 87 - -
Vivi4g00509 191 CDD DnaJ 2 61 IPR001623 -
Vivi4g00509 191 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Vivi4g00509 191 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Vivi4g00509 191 Pfam DnaJ domain 2 69 IPR001623 -
Vivi4g00509 191 SUPERFAMILY Chaperone J-domain 1 97 IPR036869 -
Vivi4g00509 191 SMART dnaj_3 1 64 IPR001623 -
Vivi4g00509 191 PRINTS DnaJ domain signature 64 83 IPR001623 -
Vivi4g00509 191 PRINTS DnaJ domain signature 44 64 IPR001623 -
Vivi4g00509 191 PRINTS DnaJ domain signature 22 37 IPR001623 -
Vivi4g00509 191 PRINTS DnaJ domain signature 4 22 IPR001623 -
Vivi4g00509 191 PANTHER CO-CHAPERONE PROTEIN DJLA 4 104 - -
Vivi4g00509 191 Gene3D DnaJ domain 1 124 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00509 Vivi-Chr4 11368838 11371669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00509 3 69 C2H2 Transcription Factor Family AT1G74250 41.791 2.58e-12 62.8