Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00503 ATGGTGTCTCAAAGTGGAACAGTTCAAGAGTCAAAGACTACTACACCTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTTCAAAACCATCTTGGTAATTTAGGGAAACCACTTGGAAGTATGAACCTTGATGAGCTTCTCAAGAGTGTGTGGAGTGTTGAAGCTGGCGAGGTTTCTGACTTCGGTACTGCTAACATGCAGCAGAATCAACTTAGCGAAATGAATCGACAGGGGAGTTTATCGTTATCGGGAGATATTAGTAAGAAAACTGTTGATGAAGTATGGAAAGATATGCAAGAAAAGAAGAGGGGTGTTGATAGGGATAGGGAAGCGCGTGAAAGACAGCAAACACTTGGTGAAATGACTTTGGAGGATTTCTTGATGAAAGCTGGTGTTGTTGGTGAATCTTTTCATAATAAGGAAGGTGGTGATTTGTTAAGGGTTGATTCGAATGAGGATTCTCGGCAAAATGTTTCACAGCATGGTCATCATTGGATGCAATTTCAGCTTCCTTCGACGCAGCAGCCTCCACAGCATCAGCATGAAAAGCATTTGATGCCTTCTTTTATGGCTGTTCATGCCATTCAACAACCTTTTCAAGTTGCAAGGAATCCGGTTTTGGATGCAGCAATGTCACCGTCTTCTCTAATGGATACACAAACGCTAGGTCGAAAAAGGGTTGCTTCTGGTATAGTGGTAGAGAAAACCGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATCGGGAATCTGCTGCTCGGTCACGAGCTAGAAGACAGGCTTATACACAAGAACTGGAACTTAAAGTTTCGCGTTTAGAAGAGGAAAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAAGGAGGTGCCATGTGCGCCGCCACCCGAGCCGAAGAATCAGCTTCGCAGAACTAATTCAGCATCCTTCTGA 942 0.431 MVSQSGTVQESKTTTPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGTANMQQNQLSEMNRQGSLSLSGDISKKTVDEVWKDMQEKKRGVDRDREARERQQTLGEMTLEDFLMKAGVVGESFHNKEGGDLLRVDSNEDSRQNVSQHGHHWMQFQLPSTQQPPQHQHEKHLMPSFMAVHAIQQPFQVARNPVLDAAMSPSSLMDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEIEKEVPCAPPPEPKNQLRRTNSASF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00503 313 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 241 293 - -
Vivi4g00503 313 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 311 IPR043452 GO:0003700|GO:0045893
Vivi4g00503 313 MobiDBLite consensus disorder prediction 1 20 - -
Vivi4g00503 313 Pfam bZIP transcription factor 243 288 IPR004827 GO:0003700|GO:0006355
Vivi4g00503 313 SUPERFAMILY Leucine zipper domain 243 290 IPR046347 GO:0003700|GO:0006355
Vivi4g00503 313 MobiDBLite consensus disorder prediction 274 313 - -
Vivi4g00503 313 MobiDBLite consensus disorder prediction 274 291 - -
Vivi4g00503 313 Coils Coil 262 293 - -
Vivi4g00503 313 SMART brlzneu 239 307 IPR004827 GO:0003700|GO:0006355
Vivi4g00503 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 286 IPR004827 GO:0003700|GO:0006355
Vivi4g00503 313 MobiDBLite consensus disorder prediction 147 166 - -
Vivi4g00503 313 Gene3D - 241 294 - -
Vivi4g00503 313 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 246 261 IPR004827 GO:0003700|GO:0006355
Vivi4g00503 313 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00503 Vivi-Chr4 11317976 11320655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00503 1 313 bZIP Transcription Factor Family AT3G56850 57.407 3.63e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g00503 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00503 K14432 - gmx:100170741 357.066