Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00502 ATGGTGTCTCAAAGTGGAACAGTTCAAGAGTCAAAGACTACTACACCTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTTCAAAACCATCTTGGTAATTTAGGGAAACCACTTGGAAGTATGAACCTTGATGAGCTTCTCAAGAGTGTGTGGAGTGTTGAAGCTGGCGAGGTTTCTGACTTCGGTACTGCTAACATGCAGCAGAATCAACTTAGCGAAATGAATCGACAGGGGAGTTTATCGTTATCGGGAGATATTAGTAAGAAAACTGTTGATGAAGTATGGAAAGATATGCAAGAAAAGAAGAGGGGTGTTGATAGGGATAGGGAAGCGCGTGAAAGACAGCAAACACTTGGTGAAATGACTTTGGAGGATTTCTTGATGAAAGCTGGTGTTGTTGGTGAATCTTTTCATAATAAGGAAGGTGGTGATTTGTTAAGGGTTGATTCGAATGAGGATTCTCGGCAAAATGTTTCACAGCATGGTCATCATTGGATGCAATTTCAGCTTCCTTCGACGCAGCAGCCTCCACAGCATCAGCATGAAAAGCATTTGATGCCTTCTTTTATGGCTGTTCATGCCATTCAACAACCTTTTCAAGTTGCAAGGAATCCGGTTTTGGATGCAGCAATGTCACCGTCTTCTCTAATGGGTGCTTTTTCAGATACACAAACGCTAGGTCGAAAAAGGGTTGCTTCTGGTATAGTGGTAGAGAAAACCGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATCGGGAATCTGCTGCTCGGTCACGAGCTAGAAGACAGGCTTATACACAAGAACTGGAACTTAAAGTTTCGCGTTTAGAAGAGGAAAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAAGGAGGTGCCATGTGCGCCGCCACCCGAGCCGAAGAATCAGCTTCGCAGAACTAATTCAGCATCCTTCTGA 954 0.4308 MVSQSGTVQESKTTTPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGTANMQQNQLSEMNRQGSLSLSGDISKKTVDEVWKDMQEKKRGVDRDREARERQQTLGEMTLEDFLMKAGVVGESFHNKEGGDLLRVDSNEDSRQNVSQHGHHWMQFQLPSTQQPPQHQHEKHLMPSFMAVHAIQQPFQVARNPVLDAAMSPSSLMGAFSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEIEKEVPCAPPPEPKNQLRRTNSASF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00502 317 Pfam bZIP transcription factor 247 292 IPR004827 GO:0003700|GO:0006355
Vivi4g00502 317 MobiDBLite consensus disorder prediction 1 20 - -
Vivi4g00502 317 SMART brlzneu 243 311 IPR004827 GO:0003700|GO:0006355
Vivi4g00502 317 SUPERFAMILY Leucine zipper domain 247 294 IPR046347 GO:0003700|GO:0006355
Vivi4g00502 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Vivi4g00502 317 MobiDBLite consensus disorder prediction 278 317 - -
Vivi4g00502 317 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
Vivi4g00502 317 MobiDBLite consensus disorder prediction 278 295 - -
Vivi4g00502 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Vivi4g00502 317 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 315 IPR043452 GO:0003700|GO:0045893
Vivi4g00502 317 Coils Coil 266 297 - -
Vivi4g00502 317 Gene3D - 245 298 - -
Vivi4g00502 317 MobiDBLite consensus disorder prediction 147 166 - -
Vivi4g00502 317 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00502 Vivi-Chr4 11317976 11320658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00502 1 317 bZIP Transcription Factor Family AT3G56850 58.025 2.73e-106 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g00502 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00502 K14432 - gmx:100170741 366.696