Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00494 ATGGCTGAGGCAAATACAGTTGAAGGGATTTTGGATTTTTTGAAGAGGAACCGATTCACACGAGCTGAGGCAGCTTTCCGAAGTGAGCTCAATAACTGTTCTGATGTAAATGGGCTCCTACAGAAGCTTACCTTGGAAGAAAAGAACTTGTGTGATTTGTCGCAGAGTGATAAGGGAAAGTTAGTGGTAGAAAATCGAGGGCTGGTTTCTCGTGATAATGTTGAAGTTTCTAAAGAACTGATAGTAAAAGAAATTGAGTGTGGTACCGGTAGAAATACTACTGAGAGCAAATGGAAAAACGCCACTCCCGCTGAGGAAAGGAATAAATCTAATGAAGTTGTTGGAACGAGCGGGACGAATTTCACTTTCTTGAAGAGTTCGGAGGACAGTGTGTTTGATTTACAGTCGTGGAAGATCAATGGTCCTGCGGAGACTTATCAAAATGACGGTGGAAGCAAGGCTAGTAGTAATACTTTGAAGCCTTCAATTTCTCAGCAATCAAAAAATCAAACGAGTGAGACCTTTGATGCGGCCAACAGTAATGTAAAAACTGCAGAGGAAAATAGTGTGTCCGCCGAGAAAAAATCGCCGTGGCTTGGTAGTAGTAGTAGTGGTAAAGCCTCTACGGAACCAAAGTTCAACATTGCACAAAACAAAGAATCTAAGGAAATTGATCGGCAGCAGCCCAAGTTTAATAGTTCGTCACTTAAAGAGAACTTAGCAGATAATGTCTTGTTGAGAGCTGACGAGAACGCCAATTCATCTTCTGACGTATGGAAAGATTGTTCTATCAAGACCGTTTTCCCTTTCCCAAAGGGGGATGTGTCTACAAGCTATAGCAGTTCAAATAACTCTGAAAAAGTTGATGAAAAAAGAAAGTCAGAAGTCAGTGATGCGAGGGCTTATATAAAAGAGCAGGTGGATGAAGTCGGGAGAGCTTTTTACTTGGCGAAATTGCAAGGAAGTTCTGAACAGAATAACATCGGTGCCGTAACTTTTCCTATTGTACCAGAGAAGCATAAGGAAGAGTATCCAAGGCTTCCACCTGTAAAAATTAAGTCCGAAGATAAGCCCTTGACTATTAATTGGAGTGAGAAGTTTGAATCTGATGGATTGGCTGCTAAGCTCTCCAGTGCTGACAGCAACTTACTTATTGGATCATATCTGGATGTCCCTATTGGACAAGAAATTAAAAATGCAGGTATGAGGAAGGCTACAGGGGGAAGTTGGCTGTCCGTAAGTCAAGGAATATCAGAGGATACATCTGATCTTGTATCAGGTTTTGCTACTGTTGGTGATGGGTTGAGCGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGACGACGACGATGATGTCGGCTACATGAGACAACCAATTGAGGATGAGGCCTGGTTTCTGGCGCATGAAATTGATTACCCTAGTGACAACGAAAAGGGGACTGGACATGGAAGTGTTCCTGATCCTCAAGAAAGAGGTCAAGCCAAAGATGAGGATGATGATCAATCTTTTGCCGAAGAAGATTCTTACTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAGCCTGTCACAGGTTCAGATGACCCTATCGGTATAACGGTTACTAATATGTATGGAAGGTCTAATGGCAATGATTTAATGGCTCAATATGACGGAGAATTGATGGATGTAGAAGAGCTGAATCTGATGCACGCAGAACCCGTCTGGCAAGGCTTTGTCCCTCAGACAAATGATCTAATCATGTTGGGAGATGGAAAAGTTCTGAATCATAGTGGAAGATCACGACTTGAAGAAATGGAAGATGATCAACATGGTTCAGTTAGGTCAATCGGGGTGGGTTTCAACAGTGATGCTGCTGATATCGGCAGTGAAGTGCATGGAAGTTTTATTGGTGGTAGTAGTGAAGGGGATTTAGAATATTTTCGCGATCGTGATAGTGGACTTGGGGGATCCAAACACTCTCATCGTGATTTTGGTAAGAATTCTATGGACAAATCATTCAAAAATAAGAAAAATGATTTGATTGAATCGAACAAATATGTCATTGGAGGTCATAAAGATGCACACTCACAAACAAAAACACATACCGATGGCAACTTTTCATTCCCTCAATCTCTTAATGATAGCCAGATAATTCAAGGTGGTTCCAGTAAGACTCCATGGTCAAATAATTGTAATAACGCTGATGAAACCGACGACTGTATTAATGCTTTTGAGGGATCTGATGAAATGCTTTCATCTTGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAACGCTAACGTGGCTAGATCTTCAAACTCTTCCCCAACTACTGTCGATGATTATGTGTATGCTGATAAAGAGCGTGTCAAGCTAGAAAAGGATGATGAAGAGGTTGACATTTCAAGGGAAGATGATTTAGGCGTATCACAAGAAGATGAAGAGATTGCTGCTGTACAAGAGCAGGTAAGGCAAATAAAGGCTCAAGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTGAACTCTGTAATAGCTGGCCGCTATCATGTCACTGAGTATCTGGGATCAGCGGCATTCAGTAAAGCAATTCAAGCTCATGATCTGCATACGGGTGTGGATGTATGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAAATCAAACTCCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTGCGGTTATATGATTACTTCTATTATAGAGAACATTTGTTAATCGTATGCGAGCTACTCAAAGCCAACTTATATGAGTTTCATAAATTTAACAGAGAATCAGGAGGGGAAGTTTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAATGTTTGGAAGCTCTTCAGTATTTACATAACCTTGGACTAATACATTGTGACTTGAAACCGGAGAATATTTTGGTTAAAAGCTACAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCATATGTTCAGTCCAGGTCCTATCGTGCTCCCGAGGTTATTCTCGGGCTTTCATATGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCCTGGCAGAACTTTGTACTGGCAATGTCTTATTCCAAAATGATTCCCCCGCAACATTACTAGCTAGGGTAATTGGGATCATCGGTCCAATCGGTCAAAGTATGCTAGCAAAAGGACGGGATACATACAAGTTCTTCACGAAAAATCACATGCTTTATGAGAGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCGAAAAAGACATCATTGAGGCATAGATTACCGATGGGGGACCAAGGTTTCATTGACTTTGTTGCTCATTTGCTCGAGGTTAACCCGAAGAAGCGGCCTTCTGCATCCGAAGCTCTAAAACACCCGTGGTTATCATACCCTTACGAGCCAATATCATCTTGA 3555 0.4107 MAEANTVEGILDFLKRNRFTRAEAAFRSELNNCSDVNGLLQKLTLEEKNLCDLSQSDKGKLVVENRGLVSRDNVEVSKELIVKEIECGTGRNTTESKWKNATPAEERNKSNEVVGTSGTNFTFLKSSEDSVFDLQSWKINGPAETYQNDGGSKASSNTLKPSISQQSKNQTSETFDAANSNVKTAEENSVSAEKKSPWLGSSSSGKASTEPKFNIAQNKESKEIDRQQPKFNSSSLKENLADNVLLRADENANSSSDVWKDCSIKTVFPFPKGDVSTSYSSSNNSEKVDEKRKSEVSDARAYIKEQVDEVGRAFYLAKLQGSSEQNNIGAVTFPIVPEKHKEEYPRLPPVKIKSEDKPLTINWSEKFESDGLAAKLSSADSNLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGQAKDEDDDQSFAEEDSYFSGEQYLQAKNVEPVTGSDDPIGITVTNMYGRSNGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMLGDGKVLNHSGRSRLEEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSFIGGSSEGDLEYFRDRDSGLGGSKHSHRDFGKNSMDKSFKNKKNDLIESNKYVIGGHKDAHSQTKTHTDGNFSFPQSLNDSQIIQGGSSKTPWSNNCNNADETDDCINAFEGSDEMLSSWRQKSSDSSPEKSSRDENANVARSSNSSPTTVDDYVYADKERVKLEKDDEEVDISREDDLGVSQEDEEIAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIGQSMLAKGRDTYKFFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 194 215 - -
Vivi4g00494 1184 FunFam Serine/threonine-protein kinase ppk15 952 1176 - -
Vivi4g00494 1184 SUPERFAMILY Protein kinase-like (PK-like) 862 1177 IPR011009 -
Vivi4g00494 1184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 143 187 - -
Vivi4g00494 1184 CDD PKc_DYRK_like 873 1175 - -
Vivi4g00494 1184 Gene3D Transferase(Phosphotransferase) domain 1 927 1175 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 92 116 - -
Vivi4g00494 1184 Coils Coil 815 845 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 477 510 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 700 731 - -
Vivi4g00494 1184 PANTHER DUAL SPECIFICITY PROTEIN KINASE 409 1175 - -
Vivi4g00494 1184 SMART serkin_6 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 692 731 - -
Vivi4g00494 1184 Gene3D Phosphorylase Kinase; domain 1 867 954 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 772 786 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 275 294 - -
Vivi4g00494 1184 FunFam Putative serine/threonine-protein kinase dyrk2 867 954 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 751 788 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 143 236 - -
Vivi4g00494 1184 MobiDBLite consensus disorder prediction 651 672 - -
Vivi4g00494 1184 Coils Coil 168 195 - -
Vivi4g00494 1184 ProSiteProfiles Protein kinase domain profile. 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00494 1184 Pfam Protein kinase domain 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00494 Vivi-Chr4 11236510 11244564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00494 872 1170 MAP Kinase Gene Family AT5G19010 31.975 9.12e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Vivi4g00494 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00494 - - mtr:25496682 2166.35