Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00490 ATGAATAGTGACATGGAAATCACGTCGCAAACTACTACACATACACCATTCACCTTTTCTGTTATAGTAGACAGGGGACAAAAAAGAATGTTGCGATATGCACGAAGAGAGATTCCAAGGAAAGAAGGTCTTGAATTGTTGAGGTGGATGGCTTTCAAAAATAACAAAGTTCATTCAAGTTATGAGGACGTTTTAAACAGGGCTGTTGCTTATGCTTCTGGCTTTCCATTAGTTTTAGAAATAGTGGGTTCCAATTTGTTTGGAAAGTGCATAGAAGAATGGAAGTGTACATTAGATGGGTATGAAAAGATTCCCAATAAAGAGATCCAAAAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAGGAACAAAGTGTGTTCCTAGATATTGCTTGTTGCTTTAAAGGTTGTAGTTTGACAGAGGTTGAAGAGATACTTCGTGCTCAGTATGGTGGCTCCATGACACATAGAATTCAAGTGTTGGCCGAAAAATCTCTCATTAAGATTGGTCATTTCGAGCAGAGTTGTATTTGTATTCTGACATTACATGACTTGATAGCGGACATGGGTAAAGAAATTGTCCGACAAAAATCACCCAAAAAACCTGAAAAACGCAGTAGGTTGTGGTTCCGAGAAGATATAATTCAAGTGTTAGAAAATAATACGGAAAATAGTGATATTGAAATCATATCTCTGGATTACGGCTCATCTGAAGCAGCAATAGATTGGAACAGAATGGCTTTCGGGAAGATGAAAAGGCTCACAACACTTATTATTAAAAGTGGTAATTTTTTCAAAGGCTCTATAGATTTTCCACGTAATTTGAGAGTATTAAAATGGCAAAAATATCACTCACAGTGTATTCCATACTGTTTTCTCAACAAGGTAAGTGAAATAAACTTATTTTTCAATCATGTATAA 924 0.3593 MNSDMEITSQTTTHTPFTFSVIVDRGQKRMLRYARREIPRKEGLELLRWMAFKNNKVHSSYEDVLNRAVAYASGFPLVLEIVGSNLFGKCIEEWKCTLDGYEKIPNKEIQKILKVSFDALEEEEQSVFLDIACCFKGCSLTEVEEILRAQYGGSMTHRIQVLAEKSLIKIGHFEQSCICILTLHDLIADMGKEIVRQKSPKKPEKRSRLWFREDIIQVLENNTENSDIEIISLDYGSSEAAIDWNRMAFGKMKRLTTLIIKSGNFFKGSIDFPRNLRVLKWQKYHSQCIPYCFLNKVSEINLFFNHV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00490 307 Gene3D - 38 121 IPR042197 -
Vivi4g00490 307 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 300 IPR044974 GO:0006952
Vivi4g00490 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 131 IPR027417 -
Vivi4g00490 307 SUPERFAMILY "Winged helix" DNA-binding domain 107 220 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00490 Vivi-Chr4 11208042 11214558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00490 33 307 WRKY Transcription Factor Family AT5G45050 29.139 6.17e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00490 - - vvo:131596774 615.535