Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00487 ATGATATATCTCGATTTCCCTTCAACGGAAACAATAATAGACTGTAATGGAAAAGCCTTCAAGAAGATGAAAAATCTCAAAACACTTATCATAAAAAATGGTTATTTATCCAAAGGTGCCCGACATCTTCCAAGTGGTCTGAGAGTATTAGAATTGCCAAGATATCGTTTAGGATGTATACCTTTTAGCATTTCGAACAAAACATTTGAGAAGATGAAAATTTTAAAACTTAACAATTGTGAACACTTAACAAATATATCTGACGTGTCGTGTCTCCCAAATTTAGAAATTTTTTCATTCAAAAAGTGCAAGAATTTAATTTCAATCGATGAGTCTATTGGCTTCCTCGATAAGCTTCAAATATTGAATGCTGAGGGTTGTGACAAGTTATCGAGTTTTCCACCTTTGAAGTTGAACTCTCTTCAAGAACTAGAACTTTCATGTTGTACAAGTCTCAAGAAATTTCCTCAAATATTGGACAAGATGAATAATATCAACTATATAACTTTGAGAGACACTGGCATAAAAGAATTTCCATCCTCATTTCAAAATCTTACCAAACTTCATAGCTTATCGATACGTGGACATGGAAAACTTATATTTCCATGTAGCATTCTCATGATGTCAAATTTGTCCGAAGTTGAAATTGAGGGTTATAGTCGATTAGTCACAAAACCGTATGATGAACTGAGTTCCTTGTTGTCTTCCAATGTGAAAGAGATTTTTATTGAAACAAGCAAAGATAAATTTCTATCAGTGGCTCTCACCTTGTTTTCTAATGTGGAAACCTTAAACTTATCCAACAGCGATATCAAAATTCTTCCTGAATGCATAAAAAAATGTTGCTTTCTAAAGAACATTTATTTGGATGGTTGCATATATCTTGAAGAAATAAGAGGGATTCCGCCAAATCTTAAAAGATTGTCATTGGGGGGCGACTTATTGACTTCATCGAGTAAAAGCATGCTAGTGAATCAGGAACTGCATGAAGCTGGAGGCACTGAGTTTCGTTTTCCATCATCCCAAAGCGAGTTGATTCCGGAGTGGTTTGAGCATCAAAGTAGAGAACGGTCTATTTCTTTTTCGTTCCGTAACAACTTCCCTTCCTTGGTTTTCTACTTTTCTTTTATAAGTATGGATGAATGGTTCTTGGAGCTAGTTTCGGGATTAAGAGTCTATTTCCTCATCAATGACTATGCATATACTCTTGATGTTCTTAAGTTTGGTAATCCTATTGATGTTCTAGGGGAATATACATATATATTTTCTTCAGATTGGAAAAAGTGGTTAGAACTAGGGGACTATACACCAAAGGGACACCCAGAACTCAAATCTATGTTGGATGATGCACTTTTGAAAAATGAATGGATTCATGCTGAAGTTGAGATTGTGGCTTATTGGAATGATGATGATGATGATGATATTGTTGTTGAAAGTTGA 1440 0.3472 MIYLDFPSTETIIDCNGKAFKKMKNLKTLIIKNGYLSKGARHLPSGLRVLELPRYRLGCIPFSISNKTFEKMKILKLNNCEHLTNISDVSCLPNLEIFSFKKCKNLISIDESIGFLDKLQILNAEGCDKLSSFPPLKLNSLQELELSCCTSLKKFPQILDKMNNINYITLRDTGIKEFPSSFQNLTKLHSLSIRGHGKLIFPCSILMMSNLSEVEIEGYSRLVTKPYDELSSLLSSNVKEIFIETSKDKFLSVALTLFSNVETLNLSNSDIKILPECIKKCCFLKNIYLDGCIYLEEIRGIPPNLKRLSLGGDLLTSSSKSMLVNQELHEAGGTEFRFPSSQSELIPEWFEHQSRERSISFSFRNNFPSLVFYFSFISMDEWFLELVSGLRVYFLINDYAYTLDVLKFGNPIDVLGEYTYIFSSDWKKWLELGDYTPKGHPELKSMLDDALLKNEWIHAEVEIVAYWNDDDDDDIVVES 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00487 479 Gene3D Ribonuclease Inhibitor 150 373 IPR032675 -
Vivi4g00487 479 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 38 314 - -
Vivi4g00487 479 SUPERFAMILY L domain-like 12 324 - -
Vivi4g00487 479 Gene3D Ribonuclease Inhibitor 2 149 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00487 Vivi-Chr4 11172677 11174701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00487 14 218 WRKY Transcription Factor Family AT4G12020 31.276 5.16e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00487 - - vvo:131594483 940.258