Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00426 ATGGAATCTAAGATGAATAGTTTTGATGGTGTCAAGTACAAAGAAGATGAAGAAGAACAAGAATTGGAATTGGAACAAGAAGAACAAAGTGGTGTTCATGAACATGGTGATCATGTAGGGGAGAATAGTGAGATTCTTAAGAGGAGAATCTCTAATCATCCACTTTATGAGTTTCTTGTTGAAGCACACTTGGATTGTTTGAAGGTTGGTGACATTTCTAACTTGGAGATAGAGAAAAAAGACAAGAAGAAAGCAATGAAGAAACAAAACTTGGATATGTTGAGCCAATCTGAACTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTAATAAGCTAAAAGAAGCAATGGAAGAACCACAACAGAATTCAATGGCTTTCATAAACAGCATGCATTCACAACTTAGGGAGCTAACTCAAGCAACCACACCTCCACCTACTGAATCACCTGCTACTACATCTTCAAGTGACTGCACATTCAGAAGAGACCCAACAATTTAA 501 0.3733 MESKMNSFDGVKYKEDEEEQELELEQEEQSGVHEHGDHVGENSEILKRRISNHPLYEFLVEAHLDCLKVGDISNLEIEKKDKKKAMKKQNLDMLSQSELDLFMEAYCLALNKLKEAMEEPQQNSMAFINSMHSQLRELTQATTPPPTESPATTSSSDCTFRRDPTI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00426 166 MobiDBLite consensus disorder prediction 139 166 - -
Vivi4g00426 166 MobiDBLite consensus disorder prediction 1 17 - -
Vivi4g00426 166 SMART KNOX2_2 89 140 IPR005541 GO:0003677|GO:0005634
Vivi4g00426 166 Coils Coil 72 92 - -
Vivi4g00426 166 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 20 143 - -
Vivi4g00426 166 SMART KNOX1_2 44 89 IPR005540 GO:0003677|GO:0005634
Vivi4g00426 166 Pfam KNOX1 domain 46 70 IPR005540 GO:0003677|GO:0005634
Vivi4g00426 166 MobiDBLite consensus disorder prediction 26 40 - -
Vivi4g00426 166 Pfam KNOX2 domain 96 139 IPR005541 GO:0003677|GO:0005634
Vivi4g00426 166 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00426 Vivi-Chr4 9407508 9411079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00426 44 141 Homeobox Transcription Factor Family AT4G08150 37.143 4.55e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00426 - - psat:127102620 253.062