Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00424 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATCCTCAAAATTCTCAAATTCCACCGATGCCACCATTTTCTACTCAAGTTTCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTGGTACTGAAAATGAAGAAAGGGTTGTTGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATACTACTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTATCGTGGGGAATCGCGGGAAAAGTTAAAGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATGTCATGGTCGCTGCAAATGCATTTTTTGCTCAGGATCAAGGTACAACATTCAACCTTGAGTACGCATGGAGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGAAAGTTCTTCAAAAATAACAAAGACATATGCTAGTGAGGCATCATCGGAGAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGAAACGCAAGATGCAAGGAATAAAAGAGCAATGTTAATGGAAAGACTAGCACAAAGTAAGGAGGACGAGATAGAATTAAAGGTAGTGCAACTAATGATGAAAGACACTTCTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAAATATGGAATGTAG 945 0.3672 MDPNHFHYQQAMFNFMQNYQNPNPQNSQIPPMPPFSTQVSPFSTQVPPFSTQVPPFSTQVGTENEERVVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWVRVAANYNQYRGESREKLKGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDVMVAANAFFAQDQGTTFNLEYAWRLLKDEPKWMGESIESSSKITKTYASEASSENPNTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNETQDARNKRAMLMERLAQSKEDEIELKVVQLMMKDTSTMSDSQRDIHEKYCNKMKKKYGM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00424 314 Coils Coil 256 276 - -
Vivi4g00424 314 MobiDBLite consensus disorder prediction 211 261 - -
Vivi4g00424 314 Pfam No apical meristem-associated C-terminal domain 180 299 IPR029466 -
Vivi4g00424 314 PANTHER - 63 311 - -
Vivi4g00424 314 MobiDBLite consensus disorder prediction 239 261 - -
Vivi4g00424 314 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00424 Vivi-Chr4 9354518 9355462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00424 35 274 Glutathione S-transferase Gene Family AT5G41240 32.031 2.23e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00424 - - vvo:131635631 516.153