Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00418 ATGTCTTGTAAACCTGGTTGGTGTGGAACCTTTATGTGCCTCTTTTGCACAATCTACACCATCATCTTCTTTTTCGCTCTTCTCTCAATTATTTTTTGGATAATAATCTCCCCCTCGAGCGTGAAATTCCACGTAACCGACGCAACTCTCACCAACTTCAACCTCACAGACAACAACAATACATTATACTACAATTTCAAACTCAACGTTACCGCGCGAAACCCTAACAACAATATCATAGTCTATTATCGAAGAATCACCGCGATTGCTTGGTATAAAGACAATGCTTTTGGTTATGTGAGTTTGACACCGTTCGACCAAGGACACAAGAATACAACATTTCTCGGACCGATTGTGTTTAATGGAAATACTAAGATCAAACTCGGACGTAAACAACTTGATGAGTATAACGAAGAGACGCGTGTTGGGATTTACAATGATTTGGCTGTTGATTTTGATATTAAAATTAGAGCTAAGTTTGGAAGCTTTTATAAGAGTGGACGGTTTAATACACCGGTTGTGCAGTGTCGTCGGTTGAGAGTTCCTTTGATTTCTACTTCCAAGGGTAACTTATCGTCATCATCAACAACATTTTCTTTTACTGAGAGAAGATGTAGCAGTGCTTCTTTCTTCACAGACCGTGATGCAGATGCAGGAGCTTGA 663 0.3967 MSCKPGWCGTFMCLFCTIYTIIFFFALLSIIFWIIISPSSVKFHVTDATLTNFNLTDNNNTLYYNFKLNVTARNPNNNIIVYYRRITAIAWYKDNAFGYVSLTPFDQGHKNTTFLGPIVFNGNTKIKLGRKQLDEYNEETRVGIYNDLAVDFDIKIRAKFGSFYKSGRFNTPVVQCRRLRVPLISTSKGNLSSSSTTFSFTERRCSSASFFTDRDADAGA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00418 220 PANTHER OS05G0367900 PROTEIN 13 188 IPR044839 GO:0098542
Vivi4g00418 220 Pfam Late embryogenesis abundant protein 69 168 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00418 Vivi-Chr4 8934483 8935429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00418 35 183 SNARE and Associated Proteins AT1G32270 31.544 1.62e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00418 - - vvo:131598780 399.823