Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00417 ATGTGTTTCAGACACTGGTTTTTGTGCCTCTATTGCACAATCTACACCCTAATATTCTTACTCATAACCACCTCAATCATCTTCTTGATAGTAATCTCCCCCTCAAGCGTGAAGTTCCACATAACCGACGCTACTCTCACCGAGTTCAACCTCACAAACAACAACTTATACTACAACTTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACATCATCGTCTATTACCGAAGAATCACCGCGATTGCTTGGTACAAAGACAATGAATTCAGTTATGTGAGTTTGGCACCCTTTGATCAAGGTCACAAGAATACAACATATCTTGGACCTATAGAGTTCAAAGGGAACCGTGTGATTAATCTAGGACGTAAACAACTTGATGAGTATAGCGAAGAGACGCGGCTCGGGGTTTACAATGATTTGGCGGTTGATTTGGATGTTCGAATTAGAGCTAAGTTTGGAAGCTTTTTTAAGAGTGGACGGTTTAATCCACCGGTTGTGCAGTGTCGTCGGTTGAGCATTCCTTTGGTTTCTTCTTCCAAGGGTAACTCATCGTCACCATCAATATTTTCTTTTAGAGTCAGAAGATGTAGTAGTGGTTCTTTCTTTACAGATCGTGATGCAGATGCAGCAGCAGCTTGA 645 0.4155 MCFRHWFLCLYCTIYTLIFLLITTSIIFLIVISPSSVKFHITDATLTEFNLTNNNLYYNFKVNITARNPNNNIIVYYRRITAIAWYKDNEFSYVSLAPFDQGHKNTTYLGPIEFKGNRVINLGRKQLDEYSEETRLGVYNDLAVDLDVRIRAKFGSFFKSGRFNPPVVQCRRLSIPLVSSSKGNSSSPSIFSFRVRRCSSGSFFTDRDADAAAA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00417 214 PANTHER OS05G0367900 PROTEIN 8 182 IPR044839 GO:0098542
Vivi4g00417 214 Pfam Late embryogenesis abundant protein 63 164 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00417 Vivi-Chr4 8833889 8834928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00417 31 181 SNARE and Associated Proteins AT1G32270 31.169 1.85e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00417 - - vvo:131598780 283.108