Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00410 ATGGTCTTCAAGGGAAGATTCTTCTCTTCCAAAAAATCTGATACTTCTAGTCCAGATGCTTCTTCCAACAGTCCTCGATCAATCTCTTCGAACTCTCCTAGATCCGATAAGAAAAAACCTAAATCAACCGTTGCTCAAACCCTAACTTCCACCTTCACCTCCACCGCCACCGCCGGAACCGGCGGCGGAGGAGGCGGAAGTGGACTCGGCGGAGGTGCGTCTACTCGGAAGACGCAAGTTAAGGAAGGGACTAAGAAGAAGGATGCTGTAAAAGGAAAGGAGAGTGAGATTCTGTTGGAATCTCGCTCTAGGTCTGGTTCGAAGAAACTGACTCCGGCGACGGTGGCGGAGGTGAAGGAGTTACCGTCGACTTTGCCTTCGCCGTATTCGTCGAATTCTTCTGCCGCGGCTTCGGTTTCGCCGATTTTAGCGTCGTCGTTAGGGTTGAATAGGATTAAGACGAGATCGGGGCCGTTACCTCAGGAGAGTTTCTTTGGTTTTAGAGGTGATAAGGGAGGAGCTGCGGCGGCGCTTGGTGCTAGTAATCTTTCGAGGCCTGGTGTTGGGAAGAAGAAGGAGGTTGGGAGTCAGAATAGAGTAGGGTTTCGGGATGGTTTGGGGATTGGTGGTAGTGTTAATCATGGAAGCAGTTCGGGGAGTGGTGCGCAGACTATGGAACAGAGTCCGGTTGTGTTGCCGCGATCGCGGTTGCAGAATGGGGAATCGTCTTCGGAAGCAGGAGAGCAGGCATCATCACAGACTCAGACTGGAGGCTTAAGAAGTGACGATGTTTGCACGCCAGAGGCCGCATATGATTTTGAGAATCCGAAAGAATCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCCGGAAAGAGGTTTCCTGGTGATATAAAGAGTTTTTCGCACGAGTTAAATTCTAAAGGTGTTCGGCCTTTTCCGTTTTGGAAGCCTCGAAGGTTAAATAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCTAAATTTGATAAAGAAAAGGAAGAGGTGAACTCCGAACTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATAATCATCCGGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGCGCTGTGCTATGACCACATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGACTTGGATGATAGGCGTCAAGAGCTTCCTCCGGGGACACTAAAGCAGCTTCATACTCGAATGCTCTTCATTCTTACACGGTGTACTAGGTTGTTGCAATTCCACAAGGAAAGTGCTTTGGCTGAGGATGAACACTTTGTCAATCTCCGTCAATCCAGAGTCTTGCATACTACTGGAAAATCTATTCCTCCTAGTTCGGTAAGGGATTCTAAAAGTACTGGTGTTGCAAAGACCTCGAAGGCTTCAACAAAGAAAGCTTATAGCCAAGAGCAGAGTACCATGGGGTGGAAAAAAGGTGTCTTGAAACCAGAGATTCAGTTGCCTCCTACTGATGATGACATTTTAAAAAACTTTGAGTCTCCTGGCAGGAATCGGATGGCTTCATGGAAAAAATTCCCATCTCCATCAGAAAAAAGCCCAAAAGAAACTGTTCAATTGAAGGACCGAAGTTATGGGACAGTTGATGTTGAACCTTCAAAGACATCAGATAAGAAATTAAATTCTGATATAGATCTCTCTGCTGCCAAGCCTTCTGAGCTTCTCCCTGTCAAAGATTCCCATGACCATGCTTCCAAGCACCAACATAAAGTTTCCTGGGGCTATTGGGGAGACCAGCAGAATAATAATGAAGATAATTCAATAATTTGTCGAATATGTGAAGAGGATGTACCGACTTTACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGTCTTGTAAGAATTTCCGAAACATTAGAAAAGATGATGGAATCATCTACTCAGAAGGATTCACAACAAATGGTCGGAAGTCCTGATGTTGCAAAAGTGTCGAATTCAAGTATGACTGAAGAATCTGAAGTTCTTTCACCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAACCTGATAATTCCGTTTTTATGGATGAGCTAAAGGGATTGCCATTAATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTACTGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCTCAGATGAATGAACTTGCTGATATAGCACGATGTGCAGCCAATGTTAGTCTGGACGATGATCGTACAGCGTCGTATTTATTATCTTGTCTTGATGATTTGAGGGTTGTCGTAGAACGAAGGAAGTTCTACGCACTTACCGTGGAAACCTTTGGAACACGCATCGAGAAGCTGATTCGTGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATGTAGATAGCCCTGTAATGGATGATGATGTCATCTTGGAAGATGACGTGGTTCGCAGCTTGAGAACAAGCCCAATTCATTCTTCAAAGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGGACGACTGGTGATCTTTTTGCAATAAAGGTTCTTAAGAAAGCAGATATGATCCGTAAGAATGCTGTAGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGGTTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAATATCTGAATGGTGGAGACTTGTATTCATTACTAAGGAATTTAGGTTGTCTAGACGAAGAAGTTGCCCGTGTATATCTGGCTGAAGTGGTTCTTGCATTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCACATGACGGTCATGTCAAGTTGACAGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGACTTATCTGGTCCGGCAGTGAGTGGGACATCCCTACTTGAGGAGGATGAGTCAGAAACATTTACATCGGAGGATCAAAGGGAACGGAGGAAGAAGCGTTCCGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGGGTATACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGGAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGTTCCTGAAGAAATGAGTTTTGAAGCACATGATCTTATTGACCGATTGTTGACAGAAGATCCTAATCAAAGACTAGGGGCTAGAGGGGCTTCAGAGGTGAAGCAGCATGTTTTCTTCAAGGACATAAACTGGGACACGCTTGCCAGGCAAAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGACGGCGGCCTTATTTACCCGCCAAGTGATTTTGAAGATTCAAGTGATGCCGATAGCTTAAGTGGCAGCAGCAGTTGCCTGAGCAATCGCCATGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCTTCCGCCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3939 0.4438 MVFKGRFFSSKKSDTSSPDASSNSPRSISSNSPRSDKKKPKSTVAQTLTSTFTSTATAGTGGGGGGSGLGGGASTRKTQVKEGTKKKDAVKGKESEILLESRSRSGSKKLTPATVAEVKELPSTLPSPYSSNSSAAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGGAAAALGASNLSRPGVGKKKEVGSQNRVGFRDGLGIGGSVNHGSSSGSGAQTMEQSPVVLPRSRLQNGESSSEAGEQASSQTQTGGLRSDDVCTPEAAYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNADNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQDLDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHFVNLRQSRVLHTTGKSIPPSSVRDSKSTGVAKTSKASTKKAYSQEQSTMGWKKGVLKPEIQLPPTDDDILKNFESPGRNRMASWKKFPSPSEKSPKETVQLKDRSYGTVDVEPSKTSDKKLNSDIDLSAAKPSELLPVKDSHDHASKHQHKVSWGYWGDQQNNNEDNSIICRICEEDVPTLHVEDHSRICAVADRCDQKGLSVNERLVRISETLEKMMESSTQKDSQQMVGSPDVAKVSNSSMTEESEVLSPKLSDWSRRGSEDMLDCFPEPDNSVFMDELKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCAANVSLDDDRTASYLLSCLDDLRVVVERRKFYALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVDSPVMDDDVILEDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYLAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHVKLTDFGLSKVGLINSTDDLSGPAVSGTSLLEEDESETFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNGEHPQTIFDNILNRKIPWPEVPEEMSFEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGGLIYPPSDFEDSSDADSLSGSSSCLSNRHDEVGDECGGLAEFDSSSSANYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 1 113 - -
Vivi4g00410 1312 ProSiteProfiles Protein kinase domain profile. 900 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 1056 1089 - -
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 460 498 - -
Vivi4g00410 1312 ProSiteProfiles AGC-kinase C-terminal domain profile. 1190 1295 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi4g00410 1312 Gene3D Transferase(Phosphotransferase) domain 1 984 1207 - -
Vivi4g00410 1312 Coils Coil 326 346 - -
Vivi4g00410 1312 CDD STKc_MAST_like 906 1194 - -
Vivi4g00410 1312 FunFam probable serine/threonine protein kinase IREH1 898 987 - -
Vivi4g00410 1312 Pfam Protein kinase domain 900 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 79 103 - -
Vivi4g00410 1312 PANTHER SERINE/THREONINE-PROTEIN KINASE 595 1285 - -
Vivi4g00410 1312 Gene3D Phosphorylase Kinase; domain 1 898 1218 - -
Vivi4g00410 1312 SUPERFAMILY Protein kinase-like (PK-like) 897 1229 IPR011009 -
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 9 31 - -
Vivi4g00410 1312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1019 1031 IPR008271 GO:0004672|GO:0006468
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 460 573 - -
Vivi4g00410 1312 SMART serkin_6 900 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 42 61 - -
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 211 261 - -
Vivi4g00410 1312 MobiDBLite consensus disorder prediction 179 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00410 Vivi-Chr4 8763352 8776234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00410 72 1306 AGC Kinase Gene Family AT3G17850 65.927 0.0 1597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vivi4g00410 Pkinase 7.1e-65 CL0016