Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00395 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATCCTCAAAATTCTCAAATTCCACCGATGCCACCATTTTCTACTCAAGTTCCACCATTTTTTACTCAAGTTGGCACTGAAAAAGAAGAAAGGGTTGTTGTTAAAAAAAAATCTCGAGAGCACTTTACAAGGGATAAGGATATACTACTTATCCAATCATGCCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGACTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACGAGTATCGTGGGCAATCGCGGGAAAAGTTAAAGGAACAATTAAAATGTCGATTGCATCGAATAAATAGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATATCATGGCCGTTGCAAATGCATTTTTTGCTCAGGATCAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAGTTCTTCAAAAATAACAAAGACTTATGCTAGTGAGGCATCATCGGAGAACCCAGATACACCTTCAAGTTATGAGTTTAACTCATCATCATCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAACGGAAGGGTAAGGAGAGTCACGTGGCTTTCCAGGTATTTGCATGGAAAGGACAGTTTTGTCGAGGTGATCATGGTAAGCCCACAATCATGCTTGAAGCAGTGGCATCACAAGACTTATGGATTTGGCATGTTTTTTTTGGTATTGCAGGTTCAAACAATGACATTAATGTGCTAAACCAATCCAACGTGTTTAACGATATTTTGGAAGGACATGCTCCCAATGGAGAAAAGAAAAAGTTATTTGCTCAACATCAAGAATCAGCTAGAAAAGATGTGGAGCGGGCATTTGGAGTGCTTCAATCTCGATTTGCAATTATACATGGCCCAGCACGTGCCTGGCACATGGACACCCTTAAGCATACCATATATGCATGCATCATATTACACAACATGATTGTTGAAGACGAACGACATACATATGGAGGTAATTTTGATTACTCTTATGATAAAGTGGATGACAACAACTCAACAACCGAAACATTTAGCGGTCCTCATCCGAATCTTGCAACAAGACTACAAAGAAGAGCAAGTATTCGAGAAAAACAAGTTCATCGTCAACTTCAAGGAGATTTAGTCGAGTATATTTGGGAATGTTTTAGACATGTAGATGATGAAATTTAA 1311 0.3837 MDPNHFHYQQAMFNFMQNYQNPNPQNSQIPPMPPFSTQVPPFFTQVGTEKEERVVVKKKSREHFTRDKDILLIQSCLNVSKDPIVGVDQKTESFWVRVAANYNEYRGQSREKLKEQLKCRLHRINSLVQKFVGCYKQAVNGKKSGTSENDIMAVANAFFAQDQGTTFNLEYAWRLLKDEPKWMGESIGSSSKITKTYASEASSENPDTPSSYEFNSSSSMERPMGQKAAKRKGKESHVAFQVFAWKGQFCRGDHGKPTIMLEAVASQDLWIWHVFFGIAGSNNDINVLNQSNVFNDILEGHAPNGEKKKLFAQHQESARKDVERAFGVLQSRFAIIHGPARAWHMDTLKHTIYACIILHNMIVEDERHTYGGNFDYSYDKVDDNNSTTETFSGPHPNLATRLQRRASIREKQVHRQLQGDLVEYIWECFRHVDDEI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00395 436 MobiDBLite consensus disorder prediction 198 223 - -
Vivi4g00395 436 MobiDBLite consensus disorder prediction 198 231 - -
Vivi4g00395 436 Pfam Plant transposon protein 301 370 IPR006912 -
Vivi4g00395 436 PANTHER - 49 237 - -
Vivi4g00395 436 Pfam No apical meristem-associated C-terminal domain 166 236 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00395 Vivi-Chr4 8653047 8655547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00395 16 235 Glutathione S-transferase Gene Family AT5G41240 32.328 7.20e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00395 - - vvo:131596753 856.284