Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00391 ATGTCTATCTCAGGAGCATTGCTAGTGACCCTTTACAAAGGTGCTCCCATTCGCAGCTTTCGAACTCAACCCTCGACACCGCAACATTTCCAGACTCTTTTAGAAGAAACCAGTTTTGTTGGAGCAGATATTGCTAATGTTTGCAATGAAGCTGCCCTGATTGCTGCAAGAACCGATGAAGCACAAGTCACAATGGATCATTTCGAGGCAGCTATTGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAAGGTCATTAAGAATGAAGATCTTGAAGAGTTAAAGGAACTGGGTTCTGATACATTTGGGACTGTTTATCATGGAAAATGGAGAGGAACAGATGTTGCTATCAAGATAATAAAGAAGAGTTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGGATCTCAGAAAGAAGCTAGCTAGGATGGAATACGGTGGTGGGATAGTGGACGACGGCGGTGTATTTGGGACTATGGTTGGAGGAGATCAAGGAGATATAATTGAGGAGCTCTTAGGAGAAGGTTGCTGGATTGAAGCTAGTGAGAATAATATGATGGCTATGCAGCAAACTGCATCGACGCAGCAACAACACTACATGGCCAATAATATTCCCATTGGAATGGGAGAAGGTGACCATGTTAATCATCATCAAGTTGATCAGGAAAGTGGTTTTGTTGTTGGGAAGAGATGGTGGATCGGGCTGAGGGCGAGTCAAGGTCCATCGACTTTGGTGAAAGAGAGATTAGTAGTTGCTATTGGTTACTTAAAAGAGTACACAAAGAACTCTTCCAACAACGTTCTTATTCACATATGGGTGCCTGTTCTAAGGAGGAGATCAGCAATTCAATATCTGCAGCAGGATTCCAGTTCATCTGTTCCGATTTCTGTGAATCCAAACATGAATGTTCATGTTCGATTCTTTAGAAGCCACGAGTATCCGCGACATCAGCAACTGCAGCAACAGTATGGTTCTCTTCTAGCATTTCCTGTGTTCGAAAGAGGAAGTGGAACATGTCTAGGTGTCATTGAGTTTGTTATCGCCAATCAAAACCTCATCAATTATCGTCCACAACTCGATCATCTCTCCAATTCTCTCGAGGCTGTTGATTTTAGAAGTAGCCACAACATGAATATTCCACCAGCAGTAAAGGTAAGGATGCATTCCATCATTCATCAAATCAATACTAGATTCAATTCTTGA 1206 0.4245 MSISGALLVTLYKGAPIRSFRTQPSTPQHFQTLLEETSFVGADIANVCNEAALIAARTDEAQVTMDHFEAAIDRIIGGLEKKNKVIKNEDLEELKELGSDTFGTVYHGKWRGTDVAIKIIKKSCFTGRSSEQERLDLRKKLARMEYGGGIVDDGGVFGTMVGGDQGDIIEELLGEGCWIEASENNMMAMQQTASTQQQHYMANNIPIGMGEGDHVNHHQVDQESGFVVGKRWWIGLRASQGPSTLVKERLVVAIGYLKEYTKNSSNNVLIHIWVPVLRRRSAIQYLQQDSSSSVPISVNPNMNVHVRFFRSHEYPRHQQLQQQYGSLLAFPVFERGSGTCLGVIEFVIANQNLINYRPQLDHLSNSLEAVDFRSSHNMNIPPAVKVRMHSIIHQINTRFNS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00391 401 Pfam AAA+ lid domain 39 70 IPR041569 -
Vivi4g00391 401 Gene3D - 24 73 - -
Vivi4g00391 401 PANTHER PROTEIN NLP8 206 376 IPR045012 GO:0003700
Vivi4g00391 401 SUPERFAMILY Protein kinase-like (PK-like) 84 127 IPR011009 -
Vivi4g00391 401 Gene3D Phosphorylase Kinase; domain 1 74 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00391 Vivi-Chr4 8461421 8463722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00391 167 393 NLP Transcription Factor Family AT2G17150 33.696 1.33e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00391 - - vvo:131596751 755.747