Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00383 ATGCAAATGCAAATGCAAATGCAAATGAAACTCTTCTTCTTTTTCCTTCTTCTTTCTTTTGTAAAACCTGACTTAACTTCCGAACGCGCCGCCCTCTTAAACCTACGCGCCGCCGTAGGCGGCCGAACCTTTCTCTGGAACACCACCTCCGCAACTCCATGTAACTGGTCCGGCGTCAAATGCGACCAAAACCACACTCACGTTGTCGAGCTTCACCTCCCTGCCGTTTCACTCACCGGAAAACTCCCCGCCGGGGTATTCCCCGACCTCCCTAACCTCCACACACTCAGTCTCCGCTTCAACTCCCTCTCCGGTCCTCTCCCCTCCGACCTCTCCGCTTGCACCTCCCTCCGTAACCTCTACCTCCAGCAGAATACTCTCTCCGGCGAACTTCCGGCGACACTCATCCAACTCACCGGTTTAGTCCGTCTGAATTTAGCTTCTAACAACTTCTCCGGCAAAATTCCGGTTGGGTTTCAAAACCTAACTCGGTTGAAAACGTTATATCTGCAAAACAACCGGTTCACCGGTTCTCTTGACGAGTTGAACCGGGTTGAACTCGATCAGTTCAACGTTTCAAACAACATGGTAAACGGTTCAGTTCCTGAAAATTTACAAGCTTTTGGTAAAGATTCGTTTTTGGGTAATAGTCTCTTATGTGGAAAACCCCTAAACCCTTGTCCTAATGAAGGAGGTGCAAATAGTGAAAATGGGGGTGGAAATAGAAATTCTTCTGGGGTTGATGATAATCAAGGGCTTGTGAAGAACAAGAAGAAAAGCAAATTATCCGGTGGTGCCATAGCTGGAATTGTTATTGGGTCTGTTGTGGTTCTTTTGATTATAGTTTTTGCTTTGATTCTTCTATGCAGGAATAAAAATGGTGAAAAAACTAGTTCAATTGATGAAGTTGCTGCAACTTTGAAGCATAATCAGCATGATGAGGGGATTCATAGTGAGAATGTTGGGAATAGGAATGGGTATTCGTCGGCCGCGGCTCTGGCGGTGCCGGCTGTGGTGAATGAAGGCGTTGTTGTGGGTGGTGGTGATAAAAAATTGGTGTTTTTTAGGAATTGGGGTAAGGTGTTTGGTTTGGAGGATTTGTTAAGAGCTTCTGCTGAGGTATTAGGGAAAGGGACTTTTGGGACTTCTTATAAGGCAGTTTTGGAAGTTGGTCCTGTGGTTGTAGCTGTGAAGAGATTAAGGGATGTGACCATTTCTGAGAGGGAGTTTAAGGAGAAGATCGAACGGGTCGGAACGATGGTTCATGAGAATTTGGCACCTCTTAGGGCTTACTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGCATATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGGAGGTAGGACACCTCTGACTTGGGAAATGAGATCGGGCATTGCACTTGGAGCTGCTCGCGGTATCGAGTACCTACATTCGCAAGGGTCGAATGTTTCACATGGAAACATCAAATCATCTAACATCCTTCTAACCAAGACCTATGAAGCAAGAGTGTCTGATTTCGGTCTTGCACATCTTGTTGGTCCTTCATCCACACCCAATAGGGTCGCCGGCTACCGTGCTCCCGAGGTAACCGATCCTCGAAAAGTTTCTCAAAAAGCCGACGTATACAGCTTCGGCGTTCTACTCTTGGAGCTTCTTACCGGAAAAGCTCCAACTCACGCCCTCATGAACGACGAAGGAGTGGACCTTCCGAGATGGGTGCAGTCGGTTGTTAAAGAAGAATGGACTTCCGAGGTCTTCGACCTCGAACTCCTAAGGTACCAAAACGTTGAAGAGGAAATGGTTCAGCTCTTGCAACTCGCAGTAGATTGTGCAGCAACATACCCCGATAACCGCCCTTCAATGTCGCAAGTACGACAGCAGATAGAAGAGTTGCATAAGTCTAGCTTGAAAGAGGGTTCTCAAGACCAAATTCAACACCCTGATTTGATCAATGACATAGATGATATCTCTTCTAGATGA 2004 0.4631 MQMQMQMQMKLFFFFLLLSFVKPDLTSERAALLNLRAAVGGRTFLWNTTSATPCNWSGVKCDQNHTHVVELHLPAVSLTGKLPAGVFPDLPNLHTLSLRFNSLSGPLPSDLSACTSLRNLYLQQNTLSGELPATLIQLTGLVRLNLASNNFSGKIPVGFQNLTRLKTLYLQNNRFTGSLDELNRVELDQFNVSNNMVNGSVPENLQAFGKDSFLGNSLLCGKPLNPCPNEGGANSENGGGNRNSSGVDDNQGLVKNKKKSKLSGGAIAGIVIGSVVVLLIIVFALILLCRNKNGEKTSSIDEVAATLKHNQHDEGIHSENVGNRNGYSSAAALAVPAVVNEGVVVGGGDKKLVFFRNWGKVFGLEDLLRASAEVLGKGTFGTSYKAVLEVGPVVVAVKRLRDVTISEREFKEKIERVGTMVHENLAPLRAYYYSRDEKLLVHDYLHMGSLSALLHGNKGGGRTPLTWEMRSGIALGAARGIEYLHSQGSNVSHGNIKSSNILLTKTYEARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALMNDEGVDLPRWVQSVVKEEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAATYPDNRPSMSQVRQQIEELHKSSLKEGSQDQIQHPDLINDIDDISSR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00383 667 Gene3D Transferase(Phosphotransferase) domain 1 445 663 - -
Vivi4g00383 667 Gene3D Phosphorylase Kinase; domain 1 351 444 - -
Vivi4g00383 667 ProSiteProfiles Protein kinase domain profile. 369 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00383 667 PANTHER OS05G0588300 PROTEIN 11 643 - -
Vivi4g00383 667 MobiDBLite consensus disorder prediction 643 667 - -
Vivi4g00383 667 FunFam pollen receptor-like kinase 1 339 444 - -
Vivi4g00383 667 Pfam Leucine rich repeat 68 127 IPR001611 GO:0005515
Vivi4g00383 667 SUPERFAMILY Protein kinase-like (PK-like) 373 642 IPR011009 -
Vivi4g00383 667 FunFam Probable inactive receptor kinase RLK902 25 183 - -
Vivi4g00383 667 Pfam Protein kinase domain 372 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00383 667 FunFam Probable inactive receptor kinase At1g48480 445 648 - -
Vivi4g00383 667 MobiDBLite consensus disorder prediction 230 251 - -
Vivi4g00383 667 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Vivi4g00383 667 MobiDBLite consensus disorder prediction 230 252 - -
Vivi4g00383 667 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Vivi4g00383 667 Gene3D Ribonuclease Inhibitor 187 227 IPR032675 -
Vivi4g00383 667 SUPERFAMILY L domain-like 41 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00383 Vivi-Chr4 8345181 8347919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00383 24 656 Receptor kinase-like Gene Family AT1G48480 58.777 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi4g00383 Pkinase 6.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00383 - - gmx:100781597 863.218