Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00382 ATGGTCTTCAAGGGAAGATTCTTCTCTTCCAAAAAATCTGATACTTCTAGTCCAGATGCTTCTTCCAACAGTCCTCGATCAATCTCTTCGAACTCTCCTAGATCCGATAAGAAAAAACCTAAATCAACCGTTGCTCAAACCCTAACTTCCACCTTCACCTCCTCCTCCACCTCCGCCGCCGGAACCGGCGGCGGAGGAGGCGGAAGTGGACTCGGCGGAGGTGCGTCTAGTCGGAAGACGCAAGTTAAGGAAGGGACTAAGAAGAAGGATGCTGTAAAAGGAAAGGAGAGTGAGATTCTGTTGGAATCTCGCTCTAGGTCTGGTTCGAAGAAACTGACTCCGGCGACGGTGGCGGAGGTGAAGGAGTTACCGTCGACTTTGCCTTCGCCGTATTCGTCGAATTCTTCTGCTGCGGCTTCTGTTTCGCCGATTTTAGCGTCGTCGTTAGGGTTGAACAGGATTAAGACGAGATCGGGACCGTTACCGCAGGAGAGTTTCTTTGGTTTTAGAGGTGATAAGGGAGGAGCTGCGGCGGCGCTTGGTGCTAGTAATCTTTCGAGGCCTGGTGTTGGGAAGAAGAAGGAGGTTGGGAGTCAGAATAGAGTAGGGTTTCGGGATGGTTTGGGGATTGGTGGTAGTGTTGATCATGGAAGCAGTTCGGGGAGTGGTGCGCAGACTATGGAACAGAGTCCGGTTGTGTTGCCGCGATCGCGGTTGCAGAACGGTGAATCGTCTTCGGAAGCAGGAGAGCAGGCATCATCACAGACTCAGACTGGAGGCTTAAGAAGTGACGATGTTTGCACGCCAGAGGCCGCATATGATTTTGAGAATCCGAAAGAATCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCCGGAAAGAGGTTTCCTGGTGATATAAAGAGTTTTTCGCACGAGTTAAATTCTAAAGGTGTTCGGCCTTTTCCGTTTTGGAAGCCTCGAAGGTTAAATAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCTAAATTTGATAAAGAAAAGGAAGAGGTGAACTCCGAACTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATAATCATCCGGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGCGCTGTGCTATGACCACATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGACTTGGATGATAGGCGTCAAGAGCTTCCTCCGGGGACACTAAAGCAGCTTCATACTCGAATGCTCTTCATTCTTACACGGTGTACTAGGTTGTTGCAATTTCACAAGGAAAGTGCTTTGGCTGAGGATGAACACTTTGTCAATCTCCGTCAATCCAGAGTCTTGCATACTACTGGAAAATCTATTCCTCCTAGTTCGGTAAGGGATTCTAAAAGTACTGGTGTTGCAAAGACCTCAAAGGCTTCAACAAAGAAAGCTTATAGCCAAGAGCAGAGTACCATGGGGTGGAAAAAAGGTGTCTTGAAACCAGAGATTCAGTTGCCTCCTACTGATGATGACATTTTAAAAAACTTTGAGTCTCCTGGCAGGAATCGGATGGCTTCATGGAAAAAATTCCCATCTCCATCAGAAAAAAGCCCAAAAGAAACTGTTCAGTTGAAGGACCGAAGTTATGGGACAGTTGATGTTGAACCTTCAAAGACATCAGATAAGAAATTAAATTCTGATATAGATCTCTCTGCTGCCAAGCCTTCTGAGCTTCTCCCTGTCAAAGATTCCCATGACCATGCTTCCAAGCACCAACATAAAGTTTCCTGGGGCTATTGGGGAGACCAGCAGAATAATAATGAAGATAATTCAATAATTTGTCGAATATGTGAAGAGGATGTACCGACTTTACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTTTGAGTGTCAATGAGCGTCTTGTAAGAATTTCCGAAACATTAGAAAAGATGATGGAATCATCTACTCAGAAGGATTCACAACAAATGGTCGGAAGTCCTGATGTTGCAAAAGTGTCGAATTCAAGTATGACTGAAGAATCTGAAGTTCTTTCACCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAACCTGATAATTCCGTTTTTATGGATGAGCTGAAGGGATTGCCATTAATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTACTGACACCAAGGACAAGTCAGATTGACTTGCTCCTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCTCAGATGAATGAACTTGCTGATATAGCACGATGTGCAGCCAATGTTAGTCTGGACGATGATCGTACAGCGTCGTATTTATTATCTTGTCTTGATGATTTGAGGGTTGTCGTAGAACGAAGGAAGTTCTATGCACTTACCGTGGAAACCTTTGGAACACGCATCGAGAAGCTGATTCGCGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATGTAGATAGCCCTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATTCATTCTTCAAAGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGGACGACTGGTGATCTTTTTGCAATAAAGGTTCTTAAGAAAGCAGATATGATCCGTAAGAATGCTGTAGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGGTTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAATATCTGAATGGTGGAGACTTGTATTCATTACTAAGGAATTTAGGTTGTCTAGACGAAGAAGTTGCCCGTGTATATCTGGCTGAAGTGGTTCTTGCATTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCCCATGACGGTCATGTCAAGTTGACAGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGACTTATCTGGTCCGGCAGTGAGTGGGACATCCCTACTTGAGGAGGATGAGTCAGAAACATTTACATCGGAGGATCAAAGGGAACGGAGGAAGAAGCGTTCCGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGGGTATACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGGAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGTTCCTGAAGAAATGAGTTTTGAAGCACATGATCTTATTGACCGATTGTTGACAGAAGATCCTAATCAAAGACTAGGGGCTAGAGGGGCTTCAGAGGTGAAGCAGCATGTTTTCTTCAAGGACATAAACTGGGACACACTTGCCAGGCAAAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGACGGCGGCCTTATTTACCCGCCAAGTGATTTTGAAGATTCAAGTGATGCCGATAGCTTAAGTGGCAGCAGCAGTTGCCTGAGCAATCGCCATGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCTTCCGCCAATTACTCTTTTAGTAATTTCTCTTTTAAGAATCTCTCCCAGCTTGCATCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3945 0.4436 MVFKGRFFSSKKSDTSSPDASSNSPRSISSNSPRSDKKKPKSTVAQTLTSTFTSSSTSAAGTGGGGGGSGLGGGASSRKTQVKEGTKKKDAVKGKESEILLESRSRSGSKKLTPATVAEVKELPSTLPSPYSSNSSAAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGGAAAALGASNLSRPGVGKKKEVGSQNRVGFRDGLGIGGSVDHGSSSGSGAQTMEQSPVVLPRSRLQNGESSSEAGEQASSQTQTGGLRSDDVCTPEAAYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNADNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQDLDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHFVNLRQSRVLHTTGKSIPPSSVRDSKSTGVAKTSKASTKKAYSQEQSTMGWKKGVLKPEIQLPPTDDDILKNFESPGRNRMASWKKFPSPSEKSPKETVQLKDRSYGTVDVEPSKTSDKKLNSDIDLSAAKPSELLPVKDSHDHASKHQHKVSWGYWGDQQNNNEDNSIICRICEEDVPTLHVEDHSRICAVADRCDQKGLSVNERLVRISETLEKMMESSTQKDSQQMVGSPDVAKVSNSSMTEESEVLSPKLSDWSRRGSEDMLDCFPEPDNSVFMDELKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCAANVSLDDDRTASYLLSCLDDLRVVVERRKFYALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVDSPVMDDDVILEDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYLAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHVKLTDFGLSKVGLINSTDDLSGPAVSGTSLLEEDESETFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNGEHPQTIFDNILNRKIPWPEVPEEMSFEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGGLIYPPSDFEDSSDADSLSGSSSCLSNRHDEVGDECGGLAEFDSSSSANYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00382 1314 ProSiteProfiles AGC-kinase C-terminal domain profile. 1192 1297 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi4g00382 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1021 1033 IPR008271 GO:0004672|GO:0006468
Vivi4g00382 1314 SMART serkin_6 902 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 1 116 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 215 263 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 1058 1091 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 462 500 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 42 63 - -
Vivi4g00382 1314 Coils Coil 328 348 - -
Vivi4g00382 1314 Pfam Protein kinase domain 902 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 462 575 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 179 266 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 9 31 - -
Vivi4g00382 1314 FunFam probable serine/threonine protein kinase IREH1 900 989 - -
Vivi4g00382 1314 Gene3D Transferase(Phosphotransferase) domain 1 986 1209 - -
Vivi4g00382 1314 ProSiteProfiles Protein kinase domain profile. 902 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00382 1314 SUPERFAMILY Protein kinase-like (PK-like) 899 1231 IPR011009 -
Vivi4g00382 1314 PANTHER SERINE/THREONINE-PROTEIN KINASE 597 1287 - -
Vivi4g00382 1314 CDD STKc_MAST_like 908 1196 - -
Vivi4g00382 1314 MobiDBLite consensus disorder prediction 81 105 - -
Vivi4g00382 1314 Gene3D Phosphorylase Kinase; domain 1 900 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00382 Vivi-Chr4 8328273 8342705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00382 74 1308 AGC Kinase Gene Family AT3G17850 66.006 0.0 1600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vivi4g00382 Pkinase 7.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00382 - - tpra:123913507 2171.74