Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00381 ATGGTCTTCAAGGGAAGATTCTTCTCTTCCAAAAAATCTGATACTTCTAGTCCAGATGCTTCTTCCAACAGTCCTCGATCAATCTCTTCGAACTCTCCTAGATCCGATAAGAAAAAACCTAAATCAACCGTTGCTCAAACCCTAACTTCCACCTTCACCTCCTCCTCCACCTCCGCCGCCGGAACCGGCGGCGGAGGAGGCGGAAGTGGACTCGGCGGAGGTGCGTCTAGTCGGAAGACGCAAGTTAAGGAAGGGACTAAGAAGAAGGATGCTGTAAAAGGAAAGGAGAGTGAGATTCTGTTGGAATCTCGCTCTAGGTCTGGTTCGAAGAAACTGACTCCGGCGACGGTGGCGGAGGTGAAGGAGTTACCGTCGACTTTGCCTTCGCCGTATTCGTCGAATTCTTCTGCTGCGGCTTCTGTTTCGCCGATTTTAGCGTCGTCGTTAGGGTTGAACAGGATTAAGACGAGATCGGGACCGTTACCGCAGGAGAGTTTCTTTGGTTTTAGAGGTGATAAGGGAGGAGCTGCGGCGGCGCTTGGTGCTAGTAATCTTTCGAGGCCTGGTGTTGGGAAGAAGAAGGAGGTTGGGAGTCAGAATAGAGTAGGGTTTCGGGATGGTTTGGGGATTGGTGGTAGTGTTGATCATGGAAGCAGTTCGGGGAGTGGTGCGCAGACTATGGAACAGAGTCCGGTTGTGTTGCCGCGATCGCGGTTGCAGAACGGTGAATCGTCTTCGGAAGCAGGAGAGCAGGCATCATCACAGACTCAGACTGGAGGCTTAAGAAGTGACGATGTTTGCACGCCAGAGGCCGCATATGATTTTGAGAATCCGAAAGAATCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCCGGAAAGAGGTTTCCTGGTGATATAAAGAGTTTTTCGCACGAGTTAAATTCTAAAGGTGTTCGGCCTTTTCCGTTTTGGAAGCCTCGAAGGTTAAATAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCTAAATTTGATAAAGAAAAGGAAGAGGTGAACTCCGAACTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATAATCATCCGGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGCGCTGTGCTATGACCACATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGACTTGGATGATAGGCGTCAAGAGCTTCCTCCGGGGACACTAAAGCAGCTTCATACTCGAATGCTCTTCATTCTTACACGGTGTACTAGGTTGTTGCAATTTCACAAGGAAAGTGCTTTGGCTGAGGATGAACACTTTGTCAATCTCCGTCAATCCAGAGTCTTGCATACTACTGGAAAATCTATTCCTCCTAGTTCGGTAAGGGATTCTAAAAGTACTGGTGTTGCAAAGACCTCAAAGGCTTCAACAAAGAAAGCTTATAGCCAAGAGCAGAGTACCATGGGGTGGAAAAAAGGTGTCTTGAAACCAGAGATTCAGTTGCCTCCTACTGATGATGACATTTTAAAAAACTTTGAGTCTCCTGGCAGGAATCGGATGGCTTCATGGAAAAAATTCCCATCTCCATCAGAAAAAAGCCCAAAAGAAACTGTTCAGTTGAAGGACCGAAGTTATGGGACAGTTGATGTTGAACCTTCAAAGACATCAGATAAGAAATTAAATTCTGATATAGATCTCTCTGCTGCCAAGCCTTCTGAGCTTCTCCCTGTCAAAGATTCCCATGACCATGCTTCCAAGCACCAACATAAAGTTTCCTGGGGCTATTGGGGAGACCAGCAGAATAATAATGAAGATAATTCAATAATTTGTCGAATATGTGAAGAGGATGTACCGACTTTACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTTTGAGTGTCAATGAGCGTCTTGTAAGAATTTCCGAAACATTAGAAAAGATGATGGAATCATCTACTCAGAAGGATTCACAACAAATGGTCGGAAGTCCTGATGTTGCAAAAGTGTCGAATTCAAGTATGACTGAAGAATCTGAAGTTCTTTCACCTAAACTTAGTGATTGGTCACGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAACCTGATAATTCCGTTTTTATGGATGAGCTGAAGGGATTGCCATTAATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTACTGACACCAAGGACAAGTCAGATTGACTTGCTCCTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCTCAGATGAATGAACTTGCTGATATAGCACGATGTGCAGCCAATGTTAGTCTGGACGATGATCGTACAGCGTCGTATTTATTATCTTGTCTTGATGATTTGAGGGTTGTCGTAGAACGAAGGAAGTTCTATGCACTTACCGTGGAAACCTTTGGAACACGCATCGAGAAGCTGATTCGCGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATGTAGATAGCCCTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATTCATTCTTCAAAGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGGACGACTGGTGATCTTTTTGCAATAAAGGTTCTTAAGAAAGCAGATATGATCCGTAAGAATGCTGTAGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGGTTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAATATCTGAATGGTGGAGACTTGTATTCATTACTAAGGAATTTAGGTTGTCTAGACGAAGAAGTTGCCCGTGTATATCTGGCTGAAGTGGTTCTTGCATTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCCCATGACGGTCATGTCAAGTTGACAGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGACTTATCTGGTCCGGCAGTGAGTGGGACATCCCTACTTGAGGAGGATGAGTCAGAAACATTTACATCGGAGGATCAAAGGGAACGGAGGAAGAAGCGTTCCGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGGGTATACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGGAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGTTCCTGAAGAAATGAGTTTTGAAGCACATGATCTTATTGACCGATTGTTGACAGAAGATCCTAATCAAAGACTAGGGGCTAGAGGGGCTTCAGAGGTGAAGCAGCATGTTTTCTTCAAGGACATAAACTGGGACACACTTGCCAGGCAAAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGACGGCGGCCTTATTTACCCGCCAAGTGATTTTGAAGATTCAAGTGATGCCGATAGCTTAAGTGGCAGCAGCAGTTGCCTGAGCAATCGCCATGATGAAGTGCAGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCTTCCGCCAATTACTCTTTTAGTAATTTCTCTTTTAAGAATCTCTCCCAGCTTGCATCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3948 0.4438 MVFKGRFFSSKKSDTSSPDASSNSPRSISSNSPRSDKKKPKSTVAQTLTSTFTSSSTSAAGTGGGGGGSGLGGGASSRKTQVKEGTKKKDAVKGKESEILLESRSRSGSKKLTPATVAEVKELPSTLPSPYSSNSSAAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGGAAAALGASNLSRPGVGKKKEVGSQNRVGFRDGLGIGGSVDHGSSSGSGAQTMEQSPVVLPRSRLQNGESSSEAGEQASSQTQTGGLRSDDVCTPEAAYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNADNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQDLDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHFVNLRQSRVLHTTGKSIPPSSVRDSKSTGVAKTSKASTKKAYSQEQSTMGWKKGVLKPEIQLPPTDDDILKNFESPGRNRMASWKKFPSPSEKSPKETVQLKDRSYGTVDVEPSKTSDKKLNSDIDLSAAKPSELLPVKDSHDHASKHQHKVSWGYWGDQQNNNEDNSIICRICEEDVPTLHVEDHSRICAVADRCDQKGLSVNERLVRISETLEKMMESSTQKDSQQMVGSPDVAKVSNSSMTEESEVLSPKLSDWSRRGSEDMLDCFPEPDNSVFMDELKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCAANVSLDDDRTASYLLSCLDDLRVVVERRKFYALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVDSPVMDDDVILEDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYLAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHVKLTDFGLSKVGLINSTDDLSGPAVSGTSLLEEDESETFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNGEHPQTIFDNILNRKIPWPEVPEEMSFEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGGLIYPPSDFEDSSDADSLSGSSSCLSNRHDEVQGDECGGLAEFDSSSSANYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00381 1315 PANTHER SERINE/THREONINE-PROTEIN KINASE 597 1288 - -
Vivi4g00381 1315 ProSiteProfiles AGC-kinase C-terminal domain profile. 1192 1298 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi4g00381 1315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1021 1033 IPR008271 GO:0004672|GO:0006468
Vivi4g00381 1315 SMART serkin_6 902 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00381 1315 Gene3D Transferase(Phosphotransferase) domain 1 986 1209 - -
Vivi4g00381 1315 Gene3D Phosphorylase Kinase; domain 1 900 1220 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 215 263 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 1236 1255 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 1058 1091 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 462 500 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 42 63 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 1 117 - -
Vivi4g00381 1315 Coils Coil 328 348 - -
Vivi4g00381 1315 Pfam Protein kinase domain 902 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 462 575 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 179 266 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 9 31 - -
Vivi4g00381 1315 FunFam probable serine/threonine protein kinase IREH1 900 989 - -
Vivi4g00381 1315 ProSiteProfiles Protein kinase domain profile. 902 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00381 1315 CDD STKc_MAST_like 908 1196 - -
Vivi4g00381 1315 MobiDBLite consensus disorder prediction 81 105 - -
Vivi4g00381 1315 SUPERFAMILY Protein kinase-like (PK-like) 899 1232 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00381 Vivi-Chr4 8328273 8342705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00381 74 1309 AGC Kinase Gene Family AT3G17850 66.165 0.0 1604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vivi4g00381 Pkinase 7.2e-65 CL0016