Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00343 ATGGATGGATTCTACGATCTGTATGGGATATTAACCGAGTCAAACGCAGCAAGAATGCCTTCCCTTATAGATCTTCAAGGAAGACCGATCTCAGGTAATGTCACATGGGAAGCTGTCTTAGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTTGAGCAGAAAGCACTCGAGCTGACCGTCGAATCGAGATGTGGTTCTGAAGTAGTTATAGATACGAATTTGGCTCACAAGCTTGCAGTATTTGTGGCTGATTATATGGGTGGACCAGTCGGAAATCCTGAAAGCATGTCAAAAGCATGGAGAAGTCTTAGTTATAGTCTGAAAACAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTTTGACTATTGGTTTAGCTCGGCATCGCGCGTTGTTATTTAAGGTTCTAGCTGATAGATTGAGTATCTCGTCGCGGTTGGTGAAAGGACAGCAATATACAGGTTCTGATGATGTGGCAATAAACTTCGTCAAGATTGATGGAAGGGAGTATATTGTTGATCTAATGGCAGACCCTGGAACTCTTATTCCATCTGACGCTACTGGATCGCATATTGAGTATGATGCATCCTTTTTTGAGGCAAGCCCTTCATCAAGAGACCTCGATTCGTCTCGTGTAGCATCATCTAGCAGTGGAGTTGGAAGTTCATCTGAAGAAACTTCGGATGTTGGAATGTCGGGCAGAGGAAACAGATCAAAACATCACCATGTTAAGAAGGTTAATTCATATGTGCATTCAAGATCATCTTCTTGGAGTGAAGGGATCGGTTCCTCTGCCGTAAACCGAATGAAAGCCAGAAACGTTTCGCAATTTATGATCGATACTACCAAGGAAAATCCTCACTTGGCTAAAAAACTTCACGATGTTTTACTCGAAAGTGGTATTGTTCCTCCTCCAAATTTATTTTCTGACATTTATCACGAAGAATCTGTTTTCTCAACGAAAGTAAAAGAACATAAACAAGAAAGTGAACATCGAGAAATGGAATTCGATGATAGTCTCGGTCCTGCTAGATTTAAGCTTGTAGAAGGTTTAGGAACCAATCTTCCTCTTCATACAAAAGAAGATGTTGGAAAATTTATACCAAGTCAGGTAAAATACGGGAAAAAGATGCCAGCTGCTGCAGCGGCAGCCGCAGCAGCCGCAGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCAAGGTCAAACACCGACTCCAACATCGAGCTTTCAGTCTCAGCAGCTGCTACTGCTGCAGCTGTAGTAGCAGCTACTGCTGCAGTTAACAAGTATGAGCCGAGCAATCGAAGTGACGCGGATACCGAAAGTTCTGGAACGAATTTGGGAAGATCTGGAAGCTCAGTTGTTAGTAATGACAGTACGAAATCTGATTGTTCTTTAGACGAAGTTGCTGAGTATGAAATTCCGTGGGAGGAAATCACACTCGGTGAACGTATTGGACTTGGATCTTATGGAGAGGTGTATCGCGGAGAATGGCGAGGAACTGAAGTTGCTGTAAAGAGGTTTCTAAATCAAGATATATCTGGTGAAGCACTTGAAGAATTCATTAGTGAGGTCAGAATAATGAAAAGATTGAGGCATCCAAATGTGGTTCTCTTCATGGGAGCTGTAATCCGACCTCCCAATCTTTCGATTGTTACTGAATTTCTACCTAGAGGAAGCTTGTATAGATTAATTCATCGGCCAAACAATCAATTAGATGAACGAAAGCGTTTGAGAATGGCCCTTGATACCGCTCGAGGAATGAACTATTTGCACAACTGCAGTCCAGTGATAGTACATCGCGATTTGAAGTCTCCGAATCTTCTTGTTGATAAAAATTGGGTTGTAAAGGTGTGTGATTTTGGCTTATCACGTATGAAGCATAGTACATTCCTTTCTTCCAGATCAACTGCAGGCACGGCCGAGTGGATGGCTCCCGAAATGTTGAGAAATGAACCGTCAAATGAAAAGTGTGATGTCTATAGCTTTGGGGTCATATTATGGGAGCTATCTACTTTGCAGCAACCTTGGAGAGGTATGAATTCCATGCAAGTTGTTGGTGCCGTGGGTTTCCAATACCGCCGTCTTGACATTCCAGACGACATGGATCCTGCCATTGCCGATATTATCAGAAAATGCTGGCAGACAGATCCTAAAGAAAGACCTACATTTGCTGAGATATTGGCAGCTCTAAAGCCGTTACAGAAGCCAAACGTCGGTTCTCAAGTGCCTCGACCGACTGTGTCCGGCAGGCACAGAAAAGATCAATCATCTGCTGCAGAAAGATAG 2292 0.4302 MDGFYDLYGILTESNAARMPSLIDLQGRPISGNVTWEAVLVNRAADSNLLKLEQKALELTVESRCGSEVVIDTNLAHKLAVFVADYMGGPVGNPESMSKAWRSLSYSLKTTLGSMVLPLGSLTIGLARHRALLFKVLADRLSISSRLVKGQQYTGSDDVAINFVKIDGREYIVDLMADPGTLIPSDATGSHIEYDASFFEASPSSRDLDSSRVASSSSGVGSSSEETSDVGMSGRGNRSKHHHVKKVNSYVHSRSSSWSEGIGSSAVNRMKARNVSQFMIDTTKENPHLAKKLHDVLLESGIVPPPNLFSDIYHEESVFSTKVKEHKQESEHREMEFDDSLGPARFKLVEGLGTNLPLHTKEDVGKFIPSQVKYGKKMPAAAAAAAAAAVVASSMVVAVARSNTDSNIELSVSAAATAAAVVAATAAVNKYEPSNRSDADTESSGTNLGRSGSSVVSNDSTKSDCSLDEVAEYEIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLNQDISGEALEEFISEVRIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDTARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVYSFGVILWELSTLQQPWRGMNSMQVVGAVGFQYRRLDIPDDMDPAIADIIRKCWQTDPKERPTFAEILAALKPLQKPNVGSQVPRPTVSGRHRKDQSSAAER 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00343 763 MobiDBLite consensus disorder prediction 431 462 - -
Vivi4g00343 763 Pfam Protein tyrosine and serine/threonine kinase 480 731 IPR001245 GO:0004672|GO:0006468
Vivi4g00343 763 Gene3D Phosphorylase Kinase; domain 1 473 557 - -
Vivi4g00343 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Vivi4g00343 763 MobiDBLite consensus disorder prediction 202 262 - -
Vivi4g00343 763 Gene3D Transferase(Phosphotransferase) domain 1 559 743 - -
Vivi4g00343 763 ProSitePatterns Protein kinases ATP-binding region signature. 486 507 IPR017441 GO:0005524
Vivi4g00343 763 Pfam Ethylene-responsive protein kinase Le-CTR1 1 183 - -
Vivi4g00343 763 FunFam Serine/threonine-protein kinase isoform 1 471 558 - -
Vivi4g00343 763 PRINTS Tyrosine kinase catalytic domain signature 640 650 IPR001245 GO:0004672|GO:0006468
Vivi4g00343 763 PRINTS Tyrosine kinase catalytic domain signature 703 725 IPR001245 GO:0004672|GO:0006468
Vivi4g00343 763 PRINTS Tyrosine kinase catalytic domain signature 554 567 IPR001245 GO:0004672|GO:0006468
Vivi4g00343 763 PRINTS Tyrosine kinase catalytic domain signature 659 681 IPR001245 GO:0004672|GO:0006468
Vivi4g00343 763 PRINTS Tyrosine kinase catalytic domain signature 593 611 IPR001245 GO:0004672|GO:0006468
Vivi4g00343 763 ProSiteProfiles Protein kinase domain profile. 480 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00343 763 MobiDBLite consensus disorder prediction 749 763 - -
Vivi4g00343 763 MobiDBLite consensus disorder prediction 736 763 - -
Vivi4g00343 763 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 219 737 - -
Vivi4g00343 763 SMART serkin_6 480 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00343 763 SUPERFAMILY Protein kinase-like (PK-like) 460 731 IPR011009 -
Vivi4g00343 763 CDD STKc_MAP3K-like 486 732 - -
Vivi4g00343 763 FunFam Serine/threonine-protein kinase CTR1 559 742 - -
Vivi4g00343 763 MobiDBLite consensus disorder prediction 203 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00343 Vivi-Chr4 7791434 7795976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00343 1 750 MAP Kinase Kinase Kinase AT1G73660 58.987 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi4g00343 PK_Tyr_Ser-Thr 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00343 - - vvo:131594415 1427.54