Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00324 ATGGATATTGAGGAGGACATCCGATCCTTACAGCTTGAGTCGGCAGAAGACAGCAATGGGGTTGTAAGTCCAGATGATGGAAAGACAGAAGTCGAGGAATCTATTAATACAAATCAAGATCCTAAGCCGGAGGTTCAAGCACAATCTATTAAGACTGATATAAAAGATAAAGAGGTTCCGCCGGTGCAAGATGAAGAGGACGAGGAGGTGGCTGTCAAAAGACACTTAAATGTTGTTTTTATTGGTCATGTGGATGCTGGTAAATCGACAACAGGAGGCCAAATACTTTTCCTCAGTGGTCAGGTCGATGAAAGGACTATCCAAAAATACGAGAAGGAAGCCAAGGACAAAAGTAGAGAGAGCTGGTATATGGCTTACATAATGGACACGAATGAGGAGGAGAGGGCCAAGGGAAAGACAGTTGAAGTTGGAAGAGCACACTTTGAGACAGAGACGTCAAGGTTTACGATTTTGGATGCACCAGGTCATAAGAGTTATGTCCCTAACATGATCAGTGGTGCATCTCAAGCTGATATTGGAGTATTGGTAATCTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAAAAAGGTGGTCAAACCCGTGAACATGTTCAGCTTGCAAAAACACTGGGTGTGTCTAAGCTCGTTGTTGTTGTTAACAAAATGGACGATCCTACAGTGAAGTGGTCAAAAGAAAGGTATGATGAAATTGAATCGAAAATGACTCCATTTCTTAAGCAATCGGGTTACAATGTGAAGAAAGATGTCCTGTTTTTACCTATATCTGGGCTGATCGGAACAAACCTAAAAACAAGAATGGGTAAAAGCATTTGTCCATGGTGGGATGGTCCTTGCCTATTTGAAGCTCTTGACGCCATTGAAATTCCTCTACGAGATCCTAAAGCTCCTTTCAGGATGCCCATACTCGACAAATTCAAAGACATGGGTACTGTTGTTATGGGCAAAGTGGAATCTGGTAGTATTCGTGAGGGAGATTCCTTGTTGATTATGCCAAATAAGGATCATGTGAAAGTTGTTGCTATATTTATTGATGAGAATCGAGTTAAACGTGCTGGACCTGGTGAAAATTTACGGGTTAGAGTATCCGGTGTTGAAGAAGAGGACATATCATCTGGATTTATCTTGTCTAGTACTGCAAATCCAATACCAGCTGTAACAGAGTTTGTTGCTCAGTTGGCAATCCTTGAATTGCTAGACAATGCAATTTTTACTGCTGGGTACAAGGCTATCCTGCATGTCCACTCTGTAGTTGAAGAATGTGAGGTTATTGAGCTCATGCATCAAATTGATCCGAAGACAAAGAAGCCTATGAAAAAGAAAGTCCTCTTTGTGAAGAATGGTGCAGGTGTTGTATGTCGAATTCAGGTTAGTAACTCCATTTGCATAGAGAAATTCTCCGACTTTCCACAACTTGGGAGATTCACTCTTCGCACTGAAGGAAAAACTGTCGCCGTGGGAAAAGTCATGGGTTTTTAA 1500 0.4167 MDIEEDIRSLQLESAEDSNGVVSPDDGKTEVEESINTNQDPKPEVQAQSIKTDIKDKEVPPVQDEEDEEVAVKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETSRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVQLAKTLGVSKLVVVVNKMDDPTVKWSKERYDEIESKMTPFLKQSGYNVKKDVLFLPISGLIGTNLKTRMGKSICPWWDGPCLFEALDAIEIPLRDPKAPFRMPILDKFKDMGTVVMGKVESGSIREGDSLLIMPNKDHVKVVAIFIDENRVKRAGPGENLRVRVSGVEEEDISSGFILSSTANPIPAVTEFVAQLAILELLDNAIFTAGYKAILHVHSVVEECEVIELMHQIDPKTKKPMKKKVLFVKNGAGVVCRIQVSNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVMGF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00324 499 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 73 302 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 CDD eRF3_C_III 391 497 - -
Vivi4g00324 499 Gene3D Translation factors 392 499 - -
Vivi4g00324 499 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 394 498 IPR009001 -
Vivi4g00324 499 Pfam Elongation factor Tu C-terminal domain 390 497 IPR004160 -
Vivi4g00324 499 CDD EF1_alpha 77 297 - -
Vivi4g00324 499 CDD eRF3_II 304 385 - -
Vivi4g00324 499 MobiDBLite consensus disorder prediction 49 67 - -
Vivi4g00324 499 Pfam Elongation factor Tu domain 2 317 383 IPR004161 GO:0005525
Vivi4g00324 499 Pfam Elongation factor Tu GTP binding domain 73 286 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 Gene3D - 25 297 IPR027417 -
Vivi4g00324 499 SUPERFAMILY Translation proteins 297 389 IPR009000 -
Vivi4g00324 499 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 301 387 - -
Vivi4g00324 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 308 IPR027417 -
Vivi4g00324 499 PANTHER TRANSLATION FACTOR 66 497 - -
Vivi4g00324 499 FunFam Putative translation elongation/initiation factor family protein 391 499 - -
Vivi4g00324 499 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 129 144 IPR031157 -
Vivi4g00324 499 PRINTS GTP-binding elongation factor signature 172 183 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 PRINTS GTP-binding elongation factor signature 136 144 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 PRINTS GTP-binding elongation factor signature 156 166 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 PRINTS GTP-binding elongation factor signature 77 90 IPR000795 GO:0003924|GO:0005525
Vivi4g00324 499 MobiDBLite consensus disorder prediction 1 67 - -
Vivi4g00324 499 Gene3D Translation factors 302 387 - -
Vivi4g00324 499 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 52 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00324 Vivi-Chr4 7413442 7423170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00324 73 494 Eukaryotic Initiation Factors Gene Family AT5G60390 37.882 1.41e-97 300