Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00316 ATGACAAATATTATACGAGAAAAATTGAAACTTATTGTTGGATTACTTGTTCTACAATTTTGTTTTGCAGGATTTCACATTGTCTCTAGACTTGCACTAAACATTGGTGTTAGCAAAGTTGTTTATGCTATTTATAGAAATTTCATTGCCTTGATTTTGTTGACTCCATTTGCTTACTTTTTAGAAAAGAATCAAAGACCACCTCTTACATTATCTTTATTGGTTCAATTTTTTCTATTGGCATTATTAGGAATCACTGCAAATGAAGGATGTTACTTGTTGGGAATGTATTATGCTTCTCCAACTTTAGCTTCTGCAATGCAAAATTCAGTTCTTGCCATCACTTTTATCTTTGCCTCAACTTTAAGACTTGAGGAAACCAACATTGCAAGAAGAGAAGGAATAGCAAAAGTTGTAGGAACCATTTCAAGTATAGGAGGTGCTATTATAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACTTGCAAATGAACCAAATACAATTAGATGAGTCTTCAACAAAAAATAAAAATTGGACATGGGGTTGTATATTCTTGCTTGGACATTGTTTATCATGGGCTGGTTGGATAGTTTTTCAGGATCCTGTTGTGAAGAAGTATCCAGCTAAACTCACAATGACTTCATTTTCATGTTTTTTTGGATTGATCCAATTCTTGATCATATCAATCTTTACAGAAAAGGATTTTGAAAAGTGGAAGATACAATCAGTAGAAGAGCTTTCTACCATCCTATATGCTGGAATTGTAGCATCAGGGGTTATGTTATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTCTTTGTTGCTGTGTTCCAACCATTACAAACTTTCCTAGTTATTCTCATGGCTGCACTTATTCTTGGAGATCACTTATACTCTGGAGGGATTATTGGTGCTATTTTCATTGTTCTGGGTCTATATTTGGTTCTATGGGGCAAAGCCAATGAAAATAAGGTGATTGAACCATCTATAACAAGGCCGTTACTTGATTCAGATGAAGAGAATAACATTACTCACACACCTTCAAAAGACTTATCTTAA 1068 0.3446 MTNIIREKLKLIVGLLVLQFCFAGFHIVSRLALNIGVSKVVYAIYRNFIALILLTPFAYFLEKNQRPPLTLSLLVQFFLLALLGITANEGCYLLGMYYASPTLASAMQNSVLAITFIFASTLRLEETNIARREGIAKVVGTISSIGGAIIITLYKGPPLLHLQMNQIQLDESSTKNKNWTWGCIFLLGHCLSWAGWIVFQDPVVKKYPAKLTMTSFSCFFGLIQFLIISIFTEKDFEKWKIQSVEELSTILYAGIVASGVMLSLQTWCIQKGGPVFVAVFQPLQTFLVILMAALILGDHLYSGGIIGAIFIVLGLYLVLWGKANENKVIEPSITRPLLDSDEENNITHTPSKDLS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00316 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 323 - -
Vivi4g00316 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Vivi4g00316 355 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Vivi4g00316 355 Pfam EamA-like transporter family 12 151 IPR000620 GO:0016020
Vivi4g00316 355 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00316 Vivi-Chr4 7315695 7317947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00316 3 349 Nodulin-like Gene Family AT3G18200 62.640 1.21e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00316 - - mtr:11414658 558.14