Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00315 ATGAGCGAAATTGCAGAGACTCACAACAAGCGCGAAGCTGATTCAGAAAACAAAGACGAACTTTCTGCATCGAAGAAGTCAAGGACTGAATCTTCGGAAAACAATGCTTCAAAGGAAGTATCTTTCCGCATTGAAGCAGACGCGGCTGAAGATAAAGGATTGCGACATTCCATGGAAGATGAATGGGTTGTTCTTCTCGACGCAGCTCGAGATTACCCTGGGAGTTTGAGATGTGCTCACTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCGGAATATGCTCAGAAGCATTTGCATGGAAATGTTCTTGCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGACTGCTAAAAGATCTATACTTGATGGTTTTCGTAAAACTGATGAGTCTCTTCTTCAAGCAAGTACTGAAGGAGGATGGCAAGATGGCGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAAAGCTTTTGTCGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAGTTTTATCTGTTGGATCCCAAAATAACTCAGACAAAGTCGATGCTCTCAAGGCCATTGTTTTGACGAGAGAACACAAACCTATATTCCCACAGGAGCGTTCACGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGATTACAAGGACGTCTTGAAGTATCTAGGGCTTTTGGAGATCGGCAATTCAAAAAGGTGGGTCTTGTTGCAACCCCAGATATCCATTCATTCGACCTTACTGATAGAGATCATTTCATAATTCTTGGTTGTGATGGATTGTGGGGGGTTTTTGGTCCTAGTGATGCTGTTGATTTTGTTCAGAAGTTGTTGAATGAGGGACTATCTGTAACAGTTGTGAGCCGCCGTCTAATAAGGGAGGCTGTTCGAGAGCGTCGATGCAAAGATAACTGCACTGCAGTTGTCATTGTATTCAAGCGAAATTAA 969 0.4376 MSEIAETHNKREADSENKDELSASKKSRTESSENNASKEVSFRIEADAAEDKGLRHSMEDEWVVLLDAARDYPGSLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLAAGLPRELLDVKTAKRSILDGFRKTDESLLQASTEGGWQDGATAVCVWVLGQKAFVANVGDAKAVLARSVLSVGSQNNSDKVDALKAIVLTREHKPIFPQERSRIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGLVATPDIHSFDLTDRDHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLSVTVVSRRLIREAVRERRCKDNCTAVVIVFKRN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00315 322 PANTHER PROTEIN PHOSPHATASE 2C 25 317 IPR015655 GO:0004722|GO:0006470
Vivi4g00315 322 ProSiteProfiles PPM-type phosphatase domain profile. 45 319 IPR001932 -
Vivi4g00315 322 MobiDBLite consensus disorder prediction 1 33 - -
Vivi4g00315 322 Pfam Protein phosphatase 2C 49 307 IPR001932 -
Vivi4g00315 322 Gene3D - 22 321 IPR036457 -
Vivi4g00315 322 FunFam Probable protein phosphatase 2C 67 32 321 - -
Vivi4g00315 322 SMART PP2C_4 41 317 IPR001932 -
Vivi4g00315 322 MobiDBLite consensus disorder prediction 1 39 - -
Vivi4g00315 322 CDD PP2Cc 49 319 IPR001932 -
Vivi4g00315 322 SUPERFAMILY PP2C-like 41 320 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00315 Vivi-Chr4 7309998 7314517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00315 1 271 PP2C-type Phosphatase Gene Family AT1G18030 62.799 6.23e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00315 K17500 - mnt:21396468 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00315 4 7309998 7314517 Vivi4g00315 4 7309998 7314517 ECH