Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00309 ATGGCTTTTCTCATGGAAATTATTATTGGTGTATTATCGGTTGTATGCTTTTGCTTTCTTCTCTTGAAATGTAATGGATTAAGGTATAGGAAGAATGGCTTGCCACCTGGTACAATGGGGTGGCCAGTTTTTGGAGAGACAACTGAGTTTCTTAAACAAGGTCCAAATTTTATGAAAAATCAAAAAGCAAGGTATGGAAGTTTTTTCAAATCACACATATTTGGAAGTCCTACAATTATTTCAATGGATGAAGAGCTTAATAGATACATATTAATGAATGAATCAAAAGGTCTTGTTGCTGGATATCCTCAATCTATGTTAGATATCTTAGGAAATTCTAACATTGCAGCTGTTCATGGCTCAGCTCATAAGTTCTTGAGAGGAGCACTTTTATCACTTGTTAGCCCACAAATGTTAAGAGATATAGTTTTGCCAAGAATTGATCGCTTTATGAGTTCTCAATTAAGTAATTGGGATGGCAAAATCTTCAACCTTCAAGATCATACTAAAGAGGTGATATTCCTCTCAATTATGGATCAGATTGCAAGTATAGACCCAACATCAAGAAGAGCTGATTATTTCAAGAAACATTTTTTTAAACTTGTTTTAGGAACCCTTTCTCTACCTATTAATCTTCCTGGAACAAATTACCGCAATGGAGTTCAGGCAAGGAAGGATTTACTTAGCATGTTGAGAAAAATACTAGAGGAAAGAAAAGCATCAAATGAAAGCTACAAAGACATGCTTAGTTGTTTAATGAAAACAGATGAAAATAAGTACAAACTAAATGATGATGAAATCCTTGACCTAGAACTTACACTTATGTATTCTGGTTATGAAACTGTTTCAACCACAACTATGATGGCTCTCAAATTTCTCCATGACAATCCCAAAGCTCTTGAAGAAATTAGAAAAGAGCACTTGGCCATAAGAGAGAAGAAAAAGCCAAATGAACCAATTGATTATGATGATATTAAATCAATGAGGTTTACTCGTGCGGTGATTTTTGAAACATCTAGATTGGCCACAGTAGTTAATGGAGTTCTACGGAAAACCAATAAAGATGTGGAACTAAATGGTTACTTAATTCCTAAAGGATGGAGAATTTATGTTTATACAAGAGAGATAAATTATGACCCTTTAATATATACTGAACCATTAACATTCAATCCATGGAGATGGATGGAGAAGAATTCTGAAACACACAATTACTTCTTGCTATTTGGAGGTGGCACTAGACTTTGTCCTGCAAAAGAGTTGGGAATCACAGAAATTTCAACTTTTTTGCACTACATTCTAACTAGATACAGGTGGGAAGAAATAGGAGAAACTAAACTAGAGAAATTTCCTAGAGTTCAAGCACCAAATGGAATGCACATGAGATTTTCATCTTACCAGCAGTTCTGA 1407 0.3447 MAFLMEIIIGVLSVVCFCFLLLKCNGLRYRKNGLPPGTMGWPVFGETTEFLKQGPNFMKNQKARYGSFFKSHIFGSPTIISMDEELNRYILMNESKGLVAGYPQSMLDILGNSNIAAVHGSAHKFLRGALLSLVSPQMLRDIVLPRIDRFMSSQLSNWDGKIFNLQDHTKEVIFLSIMDQIASIDPTSRRADYFKKHFFKLVLGTLSLPINLPGTNYRNGVQARKDLLSMLRKILEERKASNESYKDMLSCLMKTDENKYKLNDDEILDLELTLMYSGYETVSTTTMMALKFLHDNPKALEEIRKEHLAIREKKKPNEPIDYDDIKSMRFTRAVIFETSRLATVVNGVLRKTNKDVELNGYLIPKGWRIYVYTREINYDPLIYTEPLTFNPWRWMEKNSETHNYFLLFGGGTRLCPAKELGITEISTFLHYILTRYRWEEIGETKLEKFPRVQAPNGMHMRFSSYQQF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00309 468 CDD CYP90-like 64 463 - -
Vivi4g00309 468 FunFam Cytochrome P450 85A1 25 464 - -
Vivi4g00309 468 Pfam Cytochrome P450 35 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 PANTHER CYTOCHROME P450 26 32 442 - -
Vivi4g00309 468 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 PRINTS E-class P450 group I signature 156 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Vivi4g00309 468 Gene3D Cytochrome P450 26 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00309 468 SUPERFAMILY Cytochrome P450 28 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00309 Vivi-Chr4 6890449 6895667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00309 82 465 Cytochrome P450 AT5G38970 62.857 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00309 K09590 - gmx:100805958 709.909