Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00265 ATGGAAAATCATATCAATATTCTTATGATCAACTATTTCTTCTTCTTCTTCTTGTTATTAATAATCACTTTTTTTACACAACTATCCCACTCTCTACCACAACCACAACTACCTCAAACCTTAAACAGTTATTCAACATGTAAGGAACAATCTTACAACTGCGGAGATATCACCAACGTCTTTTATCCATTTTGGGGACAAAATACTTCTACTTATTGTGGTGCCGGAAGCCTATTTTACCTAAACAGTAACAAAAACGTTACTACCATTCTATTATTCTCACAAAATTTCACAGTACTTGACATCAACACTGAGAAATATACAATCAAACTCAAGAGAACAGACCTGTCTCAAAATCTCTGTTCTCCTCAATTTGATGATATTGGTTTTTCTTCTTCACCTCTGTTTCACTATCTCCCACAAGTCAAAATCATCTACATATACTTCAATTGTCCTTCCACTTTCTCTCAACTTTTACCTATAGATTCTATATGTGGATATCAGAATCAAGCATTTGATTCTACTCATTATGATGATAATCTGTCAAGGGATTGCGAAAGACATATACAAGTGCCTGCAGGAGAAGATTTTTCCACGGAGAAAAATTATTTTCAGCGTGATGAACTTCTAAGTGGCTTGGATAAGGGGTTTGAGGTGAATTATAATGTTAGCGGGGAATGTTTAGCGTGTTTGGGAAATCAAGAAGGTGATTGTAGATTCAAAAACATCAATGATTTTGAGTCCTCTTGCTATTATTGCCCAGATGGATCCCATGCTTCTTCAACACACTGTTCTTTTCATCACACTAGCTCATTGAATTTGAAGAGGAAACTCATTGTTGGCATTGCTGGAAGTGCAGTAATGGTAGCATTGTTGATGTGCATCATAATTTGTTATATTAAAGGTAAGTCATCAATACAACAACTAAAATTCCAGTTTAAGACAAAGAATGATAAAAACATCGAAGCATTTTTTAAAGAACATGGAGCTTTGACGCAAAAGAAATATAAATTTTCTGAAATAAAGAAAATGACAAATTCTTTCAAAATTAAACTTGGTCAAGGGGGTTTTGGTGTTGTGTACAAAGGAAAATTATTCAATGGTTGTCCTGTGGCGGTGAAGATATTGAATGCATCAAAAAGAAATGGTGAAGAATTTATTAATGAGGTTGCAAGTATTACTAGAACCTCACATGTTAATGTTGTCAGTCTGATTGGATTTTGTTTTGAAGGGCGTAAAAAAGCACTTGTATATGAATTTATGTCTAACGGTTCACTTGACAAATTTATTTACAATAAGGGACCTGAAACAATTGAATCTTTAAGTTGGGATAATTTGCATCAAATTGCGAAAGGAATAGCTCGTGGGCTAGAGTACTTGCACAGAGGATGCACCACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTGGATGAAAACTTTAATCCAAAGATTTCTGATTTCGGACTTGCAAAGCTTTGCCCTAGAAAAGAGAGCATAATATCAATGTCAGATCAAAGAGGAACGATGGGATATGTAGCTCCAGAAGTGTGGAATAGACATTTTGGAGGAGTTTCGTATAAGTCGGATGTTTATAGTTTTGGAATGATGTTGTTAGAAATGGTGGGTGGAAGAAAAAATATTAATGCTGATGCAAGTCACACAAGTGAGATATACTTTCCTCACTGGGTATACAGTAGGCTTGAGTTTGAAAGTGATTTGAGACCTGATGGAGTAATGGATACAGAAGAAGATGAGATTGCAAGGAGAATGACCATTGTGGGTTTGTGGTGTATTCAAACATTACCTAATGATAGGCCTACGATGAGTAAAGTGGTTGAAATGTTAGAAGTTAGCATGAATTCATTGAAAGTACCACCGAAACCATTACTTTCTTCTCCTACTAGATCATTATCTGAGTCTTAA 1935 0.3494 MENHINILMINYFFFFFLLLIITFFTQLSHSLPQPQLPQTLNSYSTCKEQSYNCGDITNVFYPFWGQNTSTYCGAGSLFYLNSNKNVTTILLFSQNFTVLDINTEKYTIKLKRTDLSQNLCSPQFDDIGFSSSPLFHYLPQVKIIYIYFNCPSTFSQLLPIDSICGYQNQAFDSTHYDDNLSRDCERHIQVPAGEDFSTEKNYFQRDELLSGLDKGFEVNYNVSGECLACLGNQEGDCRFKNINDFESSCYYCPDGSHASSTHCSFHHTSSLNLKRKLIVGIAGSAVMVALLMCIIICYIKGKSSIQQLKFQFKTKNDKNIEAFFKEHGALTQKKYKFSEIKKMTNSFKIKLGQGGFGVVYKGKLFNGCPVAVKILNASKRNGEEFINEVASITRTSHVNVVSLIGFCFEGRKKALVYEFMSNGSLDKFIYNKGPETIESLSWDNLHQIAKGIARGLEYLHRGCTTRILHFDIKPHNILLDENFNPKISDFGLAKLCPRKESIISMSDQRGTMGYVAPEVWNRHFGGVSYKSDVYSFGMMLLEMVGGRKNINADASHTSEIYFPHWVYSRLEFESDLRPDGVMDTEEDEIARRMTIVGLWCIQTLPNDRPTMSKVVEMLEVSMNSLKVPPKPLLSSPTRSLSES 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00265 644 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00265 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Vivi4g00265 644 FunFam serine/threonine-protein kinase PBS1-like 314 420 - -
Vivi4g00265 644 SUPERFAMILY Protein kinase-like (PK-like) 333 621 IPR011009 -
Vivi4g00265 644 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Vivi4g00265 644 PANTHER RUST RESISTANCE KINASE LR10-RELATED 317 636 IPR045874 GO:0004672
Vivi4g00265 644 Gene3D Transferase(Phosphotransferase) domain 1 421 628 - -
Vivi4g00265 644 Pfam Wall-associated receptor kinase galacturonan-binding 47 112 IPR025287 GO:0030247
Vivi4g00265 644 Pfam Protein kinase domain 351 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00265 644 FunFam PR5-like receptor kinase 421 631 - -
Vivi4g00265 644 CDD STKc_IRAK 352 620 - -
Vivi4g00265 644 Gene3D Phosphorylase Kinase; domain 1 306 420 - -
Vivi4g00265 644 Pfam Wall-associated receptor kinase C-terminal 172 255 IPR032872 -
Vivi4g00265 644 ProSiteProfiles Protein kinase domain profile. 346 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00265 Vivi-Chr4 6080971 6088374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00265 51 632 Receptor kinase-like Gene Family AT5G38260 40.033 6.82e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g00265 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00265 - - tpra:123887353 777.319