Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00261 ATGGTCTTTTTCATGGGAATTGGTGGTGTATTCTTGGTTCTCTATTTTTGCTATGGTCTCTTGAGATGGAATGAAATAAGGTATATGAAGAAAGGTTTGCCACCAGGCACAATGGGATGGCCAGTTTTTGGAGAGACAAGTAAGTTTCTTGGACAAGGTCCAGATTTCATGAAAAAACAAGCAGCAAGGTATGGAAGTTTTTTCAAATCACACATATTTGGTTGTCCTACGGTTATTTGTATGGATGCTGAGCTTAATAGATACATATTGATGAATGAATCAAAAGGTCTTGTTGCTGGATATCCTCAATCTATGTTGGATATCTTAGGAAATTCTAATATTGCTGCTGTTCATGGCCCTGCTCATAAGTTCTTGAGAGGTGCACTTTTATCACTTGTTAGCCCACAAATGTTGAGAGATATTGTTTTGCCAAGAATTGATAGGTTTATGAGTTCTCAATTAAGTGATTGGGATGGCAAAATCATCAACCTTCAAGTCCATACTAAAGAGGTGATATTTCTTTCAATTATGGATCAAATTGCAAGTATAGACCCAAAATCAAAAAGGGCTGATTATTTCAAGACACATTTTTTTAAGCTTGTTTTAGGAACACTTTCACTACCTATTAATCTTCCTGGAACAAATTACCGCAATGGAGTTCAGGCAAGGAAGGATTTACTTAGCATGTTGAGAAAAATACTAGAGGAAAGAAAAGCATCGAATGAAAGTTACAAAGACATGCTTAGTTGTTTAATGAAAACAGATGAAAATAAGTACAAACTAAATGAGGATGAAATCCTTGACCTAGAACTTACACTTATGTATTCTGGTTATGAAACTGTTTCAACCACATCTATGATGGTTCTCAAGTTTCTCCATGACAATCCCAAAGCTCTTGAAGAAATTAGAAAAGAGCATTTGGCCATAAGAGAGAAGAAAAAGCCAAATGAACCAATTAATTTTGATGAACTCAAATCAATGAAGTTTACACGTGCGGTGATTATGGAGACATCTAGATTGGCCACGGTAGTTAATGGAGTTCTAAGGAAAACCACTCATGATGTGGAACTAAATGGCTATTTAATTCCTAAAGGATGGAGAATATATGTGTTTACAAGGGAGATAAATTATGACAATTCTCTATATCCTGATCCATTAACATTCAATCCATGGAGATGGATGGAGAAGAATTTGGAGTCACACAATTACTTCTTGCTATTTGGAGGTGGCACTAGACTCTGTCCAGCAAAAGAGTTGGGAATCACTGAAATTTCAACTTTTTTGCACTACATTCTAACTAGATACAGGTGGGAAGAAGTGGGAGAAACTAAACTAGAGAAATTTCCCAGAGTTCAAGCACCAAATGGAATGCACATGAGATTTTCATCTTACTAG 1395 0.3599 MVFFMGIGGVFLVLYFCYGLLRWNEIRYMKKGLPPGTMGWPVFGETSKFLGQGPDFMKKQAARYGSFFKSHIFGCPTVICMDAELNRYILMNESKGLVAGYPQSMLDILGNSNIAAVHGPAHKFLRGALLSLVSPQMLRDIVLPRIDRFMSSQLSDWDGKIINLQVHTKEVIFLSIMDQIASIDPKSKRADYFKTHFFKLVLGTLSLPINLPGTNYRNGVQARKDLLSMLRKILEERKASNESYKDMLSCLMKTDENKYKLNEDEILDLELTLMYSGYETVSTTSMMVLKFLHDNPKALEEIRKEHLAIREKKKPNEPINFDELKSMKFTRAVIMETSRLATVVNGVLRKTTHDVELNGYLIPKGWRIYVFTREINYDNSLYPDPLTFNPWRWMEKNLESHNYFLLFGGGTRLCPAKELGITEISTFLHYILTRYRWEEVGETKLEKFPRVQAPNGMHMRFSSY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00261 464 PANTHER CYTOCHROME P450 26 31 442 - -
Vivi4g00261 464 Pfam Cytochrome P450 34 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 FunFam Cytochrome P450 85A1 24 463 - -
Vivi4g00261 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Vivi4g00261 464 CDD CYP90-like 63 462 - -
Vivi4g00261 464 Gene3D Cytochrome P450 24 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 SUPERFAMILY Cytochrome P450 27 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g00261 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00261 Vivi-Chr4 6041305 6046451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00261 81 464 Cytochrome P450 AT5G38970 63.377 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00261 K09590 - gmx:100805958 701.434