Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00242 ATGAACTTGATCGGCTGTTCTGTGAAGCTACTCAATGATTTTCCAGAAGGTAAACACTTTTCGAAATTACTAAATAGAAAGGATAAAGGTAGAAAGGAGAGGCCTATTGTGGTTGTACATGGAAAGCAGCAAGACGATGCTTCGAATGAGAAAAAGGACTTTAACATGGATGAAGTTCAACTTCAAACTTTTAATGAAAAGCTTGATGTCCTAGAAGTTGTTTTTGATTCTGCAAATCTCTTGTCTCTTGGAAATTCAAAACCACCGGATGCTCCTGCTTTTTCTTCTTTCCTTAGCAATGAGGATGAGGTAAGGATTTACACTACTCAGATTGTATCTACTGTTTCATATCTTCACAGCAAAGGCATTGTACATTGGGATCTTAAACCTGAAAACATACTCATGGATTCTCATGGCCATGTAATGTTAACTGATGTTGGAATGTTGAAAGAGATTGAGGAATCTGAGAGATCTAACTCTATGTTACAGAAAGCATAG 498 0.3695 MNLIGCSVKLLNDFPEGKHFSKLLNRKDKGRKERPIVVVHGKQQDDASNEKKDFNMDEVQLQTFNEKLDVLEVVFDSANLLSLGNSKPPDAPAFSSFLSNEDEVRIYTTQIVSTVSYLHSKGIVHWDLKPENILMDSHGHVMLTDVGMLKEIEESERSNSMLQKA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00242 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00242 165 PANTHER RIBOSOMAL PROTEIN S6 KINASE 100 161 - -
Vivi4g00242 165 Gene3D Transferase(Phosphotransferase) domain 1 76 164 - -
Vivi4g00242 165 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Vivi4g00242 165 Pfam Protein kinase domain 99 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g00242 165 SUPERFAMILY Protein kinase-like (PK-like) 100 155 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00242 Vivi-Chr4 5251165 5257793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00242 98 161 AGC Kinase Gene Family AT3G08730 68.750 4.24e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Vivi4g00242 Pkinase 3.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00242 K04688 - vvo:131595198 331.257